Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10007775 |
Family | GH3 |
Protein Properties | Length: 538 Molecular Weight: 58594.8 Isoelectric Point: 6.6896 |
Chromosome | Chromosome/Scaffold: 510 Start: 141681 End: 144899 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 2 | 90 | 1.3e-28 |
ADTYQPPFHSCVKEGKASGIMCAYNRVNGVPSCADYNLLSKTVRAEWGFHGYITSDCDAVSIIHDAQGYAKQPEDAVADVLKAGMDMDC |
Full Sequence |
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Protein Sequence Length: 538 Download |
MADTYQPPFH SCVKEGKASG IMCAYNRVNG VPSCADYNLL SKTVRAEWGF HGYITSDCDA 60 VSIIHDAQGY AKQPEDAVAD VLKAGMDMDC GLYLQQHSKT AVEQGKLLVS QIDRALHNLF 120 ALRMRLGLFN GDPKEQVFGN IGPDQVCSQE HQMLALEVAR NGIVLLKNSG RLLPLHKSES 180 GSIAVIGPNA NPGRTLLGNY AGPPCTLITP LQGLQAYVKD TTYIQGCENV QCSSADIEQA 240 VKTAQGADHV ILVMGLDQTQ EREELDRVDL VLPGMQQELI TRVARAAKNP VVLVLLSGGP 300 IDVSFAKYDK KIGSILWAGY PGQAGGTALA EIIFGDHNPG GRLPVTWYPQ EFVKVPMTDM 360 RMRPESSSSY PGRTYRFYKG QSVFEFGHGL SYSKYSYELK HVLHDKLYLN QSSSMSVHTV 420 DKTDSIRSIL VSNLGAEFCK GSEFAVRVGV ENQGEMAGKH PVLLFSRQGK HGNGRPRKQL 480 VGFKSVVLNA GEKGEVEFLV SPCEHLSRAN EDGVMVIEEG THFLAVGGDQ HPIDVML* 540 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
COG1472 | BglX | 4.0e-23 | 22 | 228 | 209 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
pfam00933 | Glyco_hydro_3 | 1.0e-25 | 1 | 115 | 118 | + Glycosyl hydrolase family 3 N terminal domain. |
PRK15098 | PRK15098 | 2.0e-66 | 1 | 502 | 545 | + beta-D-glucoside glucohydrolase; Provisional |
pfam01915 | Glyco_hydro_3_C | 9.0e-69 | 163 | 393 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
PLN03080 | PLN03080 | 0 | 1 | 535 | 544 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002285805.1 | 0 | 1 | 537 | 240 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302284.1 | 0 | 1 | 537 | 242 | 742 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 1 | 537 | 239 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 537 | 239 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 537 | 240 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 1 | 533 | 205 | 728 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u48_A | 0 | 1 | 533 | 205 | 728 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u4a_B | 0 | 1 | 533 | 205 | 728 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u4a_A | 0 | 1 | 533 | 205 | 728 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 4i8d_B | 6e-30 | 5 | 533 | 186 | 705 | A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG263095 | 265 | 274 | 538 | 0 |
JG140266 | 221 | 318 | 538 | 0 |
ES807938 | 319 | 218 | 536 | 0 |
EY108493 | 291 | 6 | 296 | 0 |
CF838514 | 278 | 238 | 515 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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