| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10007900 |
| Family | GH5 |
| Protein Properties | Length: 469 Molecular Weight: 52249.4 Isoelectric Point: 6.7187 |
| Chromosome | Chromosome/Scaffold: 1317 Start: 193292 End: 197073 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 103 | 391 | 1.2e-33 |
| GYPFLFNGFNSYWMMTVAAQSDQRHKVTDVFEQAKATGLTVCRTWAFSDGSAPQSLQMAPGVYNEQVFQALDFVISEARKNGIRLILTLTNNYKDYGGRP QYVSWARSVGVPVTTDDDFYTHPVLKWYYKNHLTRVLTRINTFTGFSYKDDPTIMAWELMNEPRCEADHSGDTVTRWVQEMASYVKSIDSKHLLAVGMEG FYGESTPEKQRFNPGYRVGTDFITSNLIQEIDFATIHAYPDAWLIGRSRYEQTVFMQGWITSHVADSRTILRKPLVFAEFGLSKKNTGY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 469 Download |
| MATFFFFTKT SINVTNLLLL LLLLIICNVN NAVSYDLFPD PFNITITSFL PSSPSFLPPA 60 YSSSSSTPPP APPQSSSSSS PVVVSSVPPL FIEAKNGQFL LNGYPFLFNG FNSYWMMTVA 120 AQSDQRHKVT DVFEQAKATG LTVCRTWAFS DGSAPQSLQM APGVYNEQVF QALDFVISEA 180 RKNGIRLILT LTNNYKDYGG RPQYVSWARS VGVPVTTDDD FYTHPVLKWY YKNHLTRVLT 240 RINTFTGFSY KDDPTIMAWE LMNEPRCEAD HSGDTVTRWV QEMASYVKSI DSKHLLAVGM 300 EGFYGESTPE KQRFNPGYRV GTDFITSNLI QEIDFATIHA YPDAWLIGRS RYEQTVFMQG 360 WITSHVADSR TILRKPLVFA EFGLSKKNTG YSIIGRDVFL SAIYGSIFSS ARFGGGMAGG 420 LVWQVLAEGM ESYDDGYEIV LSQSPSTCFV IALQSRRMTA LQHVLPKA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2730 | BglC | 0.006 | 131 | 266 | 145 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 3.0e-10 | 102 | 388 | 292 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 1.0e-28 | 99 | 437 | 347 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN34823.1 | 0 | 81 | 463 | 28 | 408 | endo-beta-mannanase [Daucus carota] |
| EMBL | CAC08208.1 | 0 | 83 | 464 | 30 | 409 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
| RefSeq | XP_002270023.1 | 0 | 91 | 464 | 32 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272344.1 | 0 | 91 | 464 | 31 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272567.1 | 0 | 89 | 464 | 30 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 91 | 461 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 97 | 450 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 97 | 450 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 97 | 450 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 97 | 450 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
