CAZyme Information

Basic Information
SpeciesLinum usitatissimum
Cazyme IDLus10008076
FamilyGT92
Protein PropertiesLength: 512 Molecular Weight: 58264.8 Isoelectric Point: 9.4263
ChromosomeChromosome/Scaffold: 374 Start: 292943 End: 295010
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922504740
  DYLYCGSSLYGQLSPQRVREWIAYHVRLFGERSHFVIHDAGGVYDEVYEVLKPWMDLGYVTLQDIRDQERFDGYYHNQFMVVNDCLHRYKFMAKWMFFFD
  VDEFIYVPPKSTIKSVLDSLSDYSQFTIEQMPMNSKLCLNADYGRYYRRWGLEKLVYKDAKTGIRRDRKYAIQPRNVYATGVHMSQNLGGKTTHKTEGRI
  KYYHYHGSIAQRREPCRKLLNVTKT
Full Sequence
Protein Sequence     Length: 512     Download
MGVVLNCAPE LKLILTALLI LCSLVTLLQF LPSRFTISTS DLRFCISRIT TTTTTTTTTT    60
EPVAIFPLNS TSSSAALTTS HLVVPPPPLP SSAVDKEKIL DNGVIKRIFN PYGSAAYSFI    120
TMGTYRGGLN TFAINGLASK PLHLYSKPTY QCEWLPDSSS NSSSAPKPVT TVGYKMLPDW    180
GYGRVYTVVI INCTFSQPIN TDNSGGKLYL IAYSSGGGDT KFNTTDRFEI LDEPKGSVDF    240
AVFKSKPKYD YLYCGSSLYG QLSPQRVREW IAYHVRLFGE RSHFVIHDAG GVYDEVYEVL    300
KPWMDLGYVT LQDIRDQERF DGYYHNQFMV VNDCLHRYKF MAKWMFFFDV DEFIYVPPKS    360
TIKSVLDSLS DYSQFTIEQM PMNSKLCLNA DYGRYYRRWG LEKLVYKDAK TGIRRDRKYA    420
IQPRNVYATG VHMSQNLGGK TTHKTEGRIK YYHYHGSIAQ RREPCRKLLN VTKTTFEKTP    480
YVLDTTMRDI AWAVKKFENR MIGTRLQNTR Q* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13704Glyco_tranf_2_44.0e-626936699+
pfam01697Glyco_transf_922.0e-25249478250+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_199280.10651121519unknown protein [Arabidopsis thaliana]
RefSeqXP_002263686.10151114526PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002299381.101225111387predicted protein [Populus trichocarpa]
RefSeqXP_002303721.101225111387predicted protein [Populus trichocarpa]
RefSeqXP_002533995.10151122520conserved hypothetical protein [Ricinus communis]
Transmembrane Domains
StartEnd
1332
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO780532415995120
HO7963983801345120
EH7921893931265080
JG1781822981864830
JG2218662951864800
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s198_141V6.1Pp1s227_17V6.1Pp1s35_63V6.1
Pp1s32_144V6.1Pp1s112_159V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1
Pp1s25_268V6.1Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)