| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10008239 |
| Family | AA3 |
| Protein Properties | Length: 760 Molecular Weight: 83010.7 Isoelectric Point: 6.9445 |
| Chromosome | Chromosome/Scaffold: 157 Start: 266193 End: 268637 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 236 | 758 | 9.94922e-44 |
| VQDEEHDTVKIRCDAVIVGSGCGGGVAAAILARSGLKVIVLEKGNYFTSEDYSLLEGPSLEELYERGGKMSTSNGETSILAGSTVGGGTAVNWSACIKTP DSVLRDWSVDHKLPLFGSLEYREAVEAVWKRIGVTDNCKEEGFQNKVLRKGCENLGLKVEPVSRNSSEDHYCGSCSYGCRTGDKRGTDTTWLVDAVKNDA VIITGCKAEQFVLADDDGGRKKRCLGVVARSLNPKLEKKKLHIEAQVTVSAGGALLTPPLMIASGLKNPHIGNNLHLHPVLMAWGYFPEQGSPNFKGKMY EGGIITSIHKMESSDDSSNNTTAIIECATVGPASYAASSPWTSGRDLKEKMVKYPRTAVLFALVRDRGSGEVKVEGKISHQLDKQDKENLRTGLRQVLRI LVAAGAAEVGTYRSDGQRIKCQGMTEKDFELFLDSVVVNGGGLQSTDTNWMAFFSAHQMGSCRMGATEEDGGVDENGESWEAKGLFVCDGSLLPSAIGVN PMVTIQSTAFCIANRIAESLKKR | |||
| Full Sequence |
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| Protein Sequence Length: 760 Download |
| MKETMEGKTE ICQSNTLLRG SSSSYSHGFS PDQMQSLSAI CESFLPPLTL SEKDGILKGI 60 PFDRQQALLS FCEASGSDAP IPDEVAELMV KRNTPEGVLL MKLAFKLLSS RFGTLLLAGV 120 SSLDWKWPFI HNFSELPLEK REQILRKWRG EKLFTPLRVV FAMTKVFSLF VFFSRIDETL 180 KNPAWEAIGY RVDDARKCTS KTKRERPLEK GIVETIHGDD FTGFIQSLVE KGLQVVQDEE 240 HDTVKIRCDA VIVGSGCGGG VAAAILARSG LKVIVLEKGN YFTSEDYSLL EGPSLEELYE 300 RGGKMSTSNG ETSILAGSTV GGGTAVNWSA CIKTPDSVLR DWSVDHKLPL FGSLEYREAV 360 EAVWKRIGVT DNCKEEGFQN KVLRKGCENL GLKVEPVSRN SSEDHYCGSC SYGCRTGDKR 420 GTDTTWLVDA VKNDAVIITG CKAEQFVLAD DDGGRKKRCL GVVARSLNPK LEKKKLHIEA 480 QVTVSAGGAL LTPPLMIASG LKNPHIGNNL HLHPVLMAWG YFPEQGSPNF KGKMYEGGII 540 TSIHKMESSD DSSNNTTAII ECATVGPASY AASSPWTSGR DLKEKMVKYP RTAVLFALVR 600 DRGSGEVKVE GKISHQLDKQ DKENLRTGLR QVLRILVAAG AAEVGTYRSD GQRIKCQGMT 660 EKDFELFLDS VVVNGGGLQS TDTNWMAFFS AHQMGSCRMG ATEEDGGVDE NGESWEAKGL 720 FVCDGSLLPS AIGVNPMVTI QSTAFCIANR IAESLKKRR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.0003 | 690 | 755 | 67 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 1.0e-19 | 618 | 744 | 133 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 3.0e-23 | 266 | 753 | 549 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-87 | 296 | 515 | 223 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 25 | 757 | 1 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 13 | 758 | 4 | 738 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 8 | 758 | 3 | 749 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 13 | 758 | 4 | 738 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 15 | 757 | 8 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.0000008 | 248 | 730 | 18 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3cnj_A | 0.0002 | 689 | 751 | 437 | 494 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 2gew_A | 0.0002 | 689 | 751 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4w_A | 0.0002 | 689 | 751 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4v_A | 0.0002 | 689 | 751 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 729 | 33 | 755 | 0 |
| HO779224 | 442 | 226 | 665 | 0 |
| FN753067 | 302 | 269 | 570 | 0 |
| EX275136 | 295 | 454 | 748 | 0 |
| ES815664 | 324 | 348 | 669 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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