Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10008259 |
Family | GH35 |
Protein Properties | Length: 830 Molecular Weight: 91265.7 Isoelectric Point: 6.0229 |
Chromosome | Chromosome/Scaffold: 388 Start: 225308 End: 235668 |
Description | beta-galactosidase 16 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 344 | 0 |
LIIGGQRKILFSGSIHYPRSTPEMWPTMISKAKEGGIDVIATYVFSNLHEPKPGQYDFSGGLDLIGFVKEVQAQGLYVFLRIGPFIEAERSYGGLPIWLR DIPGIVFRCDNDPYKAYMQNFTTTIVTMLQTQNLFASQGGPIILSQIENEYTNVESAYGEKGKSYLQWVAQMAVGLNTGVPWVMCKQDDAPDPLINACNG KKCGETFVGPNSPNKPAIWTENWTTRYQVYGEDAVVRSATDIAYHTLLFILAKNGTFINYYMYHGGSNFGRSASAFVTTNYYDLAPIDEYGMERQTKWGH LKELHA |
Full Sequence |
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Protein Sequence Length: 830 Download |
MVMILAELVN AALIMVAALV ASYAVTGAGG EVTYDGRSLI IGGQRKILFS GSIHYPRSTP 60 EMWPTMISKA KEGGIDVIAT YVFSNLHEPK PGQYDFSGGL DLIGFVKEVQ AQGLYVFLRI 120 GPFIEAERSY GGLPIWLRDI PGIVFRCDND PYKAYMQNFT TTIVTMLQTQ NLFASQGGPI 180 ILSQIENEYT NVESAYGEKG KSYLQWVAQM AVGLNTGVPW VMCKQDDAPD PLINACNGKK 240 CGETFVGPNS PNKPAIWTEN WTTRYQVYGE DAVVRSATDI AYHTLLFILA KNGTFINYYM 300 YHGGSNFGRS ASAFVTTNYY DLAPIDEYGM ERQTKWGHLK ELHAAVKSCA GPLLSGLQVN 360 YPVGPNQWAY VYNNGETGEC DTAFLVNREK HGNTSVSVTF QHASYELPPK SISILPDCKN 420 VAFNTAEVET QPNSRAMSRS EVLDRPEMWE EYREVVPSFD DTTSLRSQKL LDHISTTKDA 480 SDYLWYTFRY EKQQDNWSNN SALLNVSSLG HALHAFINGR HIGSGHGSHQ VPKFSLLVEI 540 PPDAIIDGIN NITLLSVSVG LPDSGAYQER AALGPVKVVI IDTNQVSHDF TRYSWGYQVG 600 MLGDRLQIFS EQGAGQVEWK SFSNAFNPIT WYKTSFDAPL GDSPIALNLG SMAKGEAWVN 660 GQSIGRFWPS YHTPNGSSQT WYHVPRSWVN PNGNILVVLE EEGGNPLNIT VDTVAITAQI 720 CSLVGEEAAG GINSRNRRGS SSSSSSSKSK GIGLKLRCPS RTKISKITFA SYGTPIGSCG 780 TTSMLTSAHN YMEGSCHSFN SIPTLEKLES EFQDREIAFG PYVESMYKS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13364 | BetaGal_dom4_5 | 0.0001 | 629 | 699 | 73 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
pfam02449 | Glyco_hydro_42 | 6.0e-5 | 54 | 137 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 8.0e-16 | 32 | 193 | 173 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 9.0e-132 | 38 | 346 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 3 | 807 | 837 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18990.1 | 0 | 18 | 807 | 14 | 781 | unnamed protein product [Vitis vinifera] |
EMBL | CBI18991.1 | 0 | 33 | 807 | 33 | 785 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284529.1 | 0 | 33 | 807 | 25 | 777 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327281.1 | 0 | 13 | 807 | 5 | 752 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521778.1 | 0 | 29 | 807 | 21 | 792 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 4e-34 | 38 | 329 | 14 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.00005 | 614 | 703 | 493 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 7e-27 | 31 | 329 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 7e-27 | 31 | 329 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |