y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10008279 |
Family | GT5 |
Protein Properties | Length: 608 Molecular Weight: 65890.6 Isoelectric Point: 6.1121 |
Chromosome | Chromosome/Scaffold: 489 Start: 106475 End: 110640 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 84 | 578 | 0 |
VFISAECGPWSKTGGLGDVLGGLPPAMAARGHRVMTVCPRYDQYKDAWDTGVLVELPVGDKLETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTGSKVYGP TAGTDYKDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVLFIANDWHTALLPCYLRAIYQANGIYTNAKVAFCIHNIAYQGRFGFSDFSLLNLPDS FRSSFDFMDGSAKPVKGRKINWMKAGILESDRVVTVSPYYAEELVSGEDKGVELDNILRVKTVAGIANGMDVQEWNPATDKYIDVKYDATTVMDAKPLLK ETLQAECGLPVDSSIPVFGFIGRLEEQKGSDILCEAIPQLIEQDLQIIILGTGKKHMEKQVQELEQLYPDKVRGVAKFNVPLAHMITAGADFMLVPSRFE PCGLIQLHAMRYGTVPCVASTGGLVDTVKEGYTGFQMGALNVNCEAVDQADVVKIIAAVTRVLATFGTAALKEMIQNGMAQDLSWKGPARLWEKM |
Full Sequence |
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Protein Sequence Length: 608 Download |
MATITAAHFV SRATVHVSSD AKQAAAAVGL MSHHGPRTVN MGDKLQIRTQ PKSIASTRAG 60 KVVAAATTTD SSTTIGSEIG MDLVFISAEC GPWSKTGGLG DVLGGLPPAM AARGHRVMTV 120 CPRYDQYKDA WDTGVLVELP VGDKLETVRF FHCYKRGVDR VFVDHPLFLE KVWGKTGSKV 180 YGPTAGTDYK DNQLRFSLLC QAALEAPRVL NLNSSKYFSG PYGEDVLFIA NDWHTALLPC 240 YLRAIYQANG IYTNAKVAFC IHNIAYQGRF GFSDFSLLNL PDSFRSSFDF MDGSAKPVKG 300 RKINWMKAGI LESDRVVTVS PYYAEELVSG EDKGVELDNI LRVKTVAGIA NGMDVQEWNP 360 ATDKYIDVKY DATTVMDAKP LLKETLQAEC GLPVDSSIPV FGFIGRLEEQ KGSDILCEAI 420 PQLIEQDLQI IILGTGKKHM EKQVQELEQL YPDKVRGVAK FNVPLAHMIT AGADFMLVPS 480 RFEPCGLIQL HAMRYGTVPC VASTGGLVDT VKEGYTGFQM GALNVNCEAV DQADVVKIIA 540 AVTRVLATFG TAALKEMIQN GMAQDLSWKG PARLWEKMLL GLEAAGSEAG IEGDEIAPLA 600 KENVATP* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-75 | 86 | 585 | 526 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 9.0e-97 | 81 | 572 | 510 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 2.0e-121 | 81 | 578 | 509 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 1.0e-161 | 81 | 582 | 510 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 8.0e-165 | 84 | 579 | 509 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ11735.1 | 0 | 1 | 607 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
GenBank | ACJ11751.1 | 0 | 1 | 607 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
GenBank | ACM78591.1 | 0 | 1 | 607 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
GenBank | ACV72639.1 | 0 | 1 | 607 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
Swiss-Prot | Q43784 | 0 | 1 | 607 | 1 | 608 | SSG1_MANES RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 81 | 607 | 10 | 536 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 3vue_A | 0 | 81 | 607 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 81 | 583 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 81 | 583 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 81 | 583 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ568414 | 616 | 1 | 608 | 0 |
HO629148 | 530 | 80 | 608 | 0 |
HO825853 | 517 | 89 | 605 | 0 |
CN831271 | 382 | 227 | 608 | 0 |
HO778340 | 371 | 80 | 448 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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