| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10008432 |
| Family | GH3 |
| Protein Properties | Length: 622 Molecular Weight: 67098.5 Isoelectric Point: 9.3687 |
| Chromosome | Chromosome/Scaffold: 61 Start: 168800 End: 172812 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 112 | 334 | 0 |
| LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNIGDATAKEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHTIVQKMTEIIPGLQGDIPANSRKGVPFV DNGGTKVAACAKHYVGDGGTTKGINENNTVIPSNELMSIHMPAYFNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKEKMKFRGFVISDWQGIDRITS PPHVNYSSSVTAGVSAGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 622 Download |
| MGRALFARSS ILLLLLVVLL AGEAAASAGS NYLKYKDPKQ PVGARIKDLL KRMTVEEKVG 60 QMVQIDRLVS SPDVMKKYFL GSVLSGGGSV PAKKASAEQW VNMVNGLQKG ALSTRLGIPM 120 IYGIDAVHGH NNVYKATIFP HNIGDATAKE VRATGIPYAF APCIAVCRDP RWGRCYESYS 180 EDHTIVQKMT EIIPGLQGDI PANSRKGVPF VDNGGTKVAA CAKHYVGDGG TTKGINENNT 240 VIPSNELMSI HMPAYFNSIS KGVATVMVSY SSWNGKKMHA NHELVTGFLK EKMKFRGFVI 300 SDWQGIDRIT SPPHVNYSSS VTAGVSAGID MVMVAYNYTE FINILTYQVK NKIIPMSRID 360 DAVQRILRVK FIMGLFEKPI ADYSLANEIG KQEHRDIARE AVRKSLVLLK NGKAAAKPLL 420 PLPKKAPKIL VAGSHADNLG NQCGGWTIEW QGVTGNDVTA GTTILNGVKS VVDPTTQVVY 480 SESPDANFVK SNKFSYAIVV VGEPPYSETQ GDSLNLTIPA AGLSTINNVC GTVQCVVVLI 540 TGRPVVIQPY LGKIDALVAA WLPGSEGQGV TDVLFGDYGF TGKLARTWFK SVDQLPMNVG 600 DPHYDPLFPF GFGLTTEPVK A* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 3.0e-28 | 115 | 598 | 555 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 6.0e-41 | 431 | 615 | 203 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 2.0e-64 | 38 | 615 | 663 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 1.0e-66 | 53 | 469 | 442 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-77 | 54 | 369 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ17461.1 | 0 | 30 | 618 | 23 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
| RefSeq | XP_002278363.1 | 0 | 15 | 620 | 8 | 626 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002278377.1 | 0 | 11 | 620 | 8 | 627 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002313632.1 | 0 | 12 | 620 | 11 | 626 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523935.1 | 0 | 30 | 620 | 27 | 631 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 31 | 620 | 1 | 603 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1iex_A | 0 | 31 | 620 | 1 | 603 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1iew_A | 0 | 31 | 620 | 1 | 603 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1iev_A | 0 | 31 | 620 | 1 | 603 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ieq_A | 0 | 31 | 620 | 1 | 603 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
