Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10008518 |
Family | GT8 |
Protein Properties | Length: 482 Molecular Weight: 53709.6 Isoelectric Point: 8.1973 |
Chromosome | Chromosome/Scaffold: 835 Start: 207165 End: 210247 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 60 | 268 | 2.9e-29 |
DYEFYVATRVLLRSLRSLSVNADLVVIASLDVPPRWVQAMEKEDGARVVSVENVNNPYKDQSNFDHRFKLTLNKLYAWSLVDYERVVMLDADNLFLRNTD ELFQCGQFCAAFINPCIFHTGLFVLQPSNEVFKDMLHQLEVGKDNPDGADQGFIGGYFPDLLDKPLFHPPANGSVVAGGNPDLRLRWNVPCGPNSVITFP GASWLKPWY |
Full Sequence |
---|
Protein Sequence Length: 482 Download |
MASCNGLLLL FFLALAVLGG SETAAFGPEK GEKKMTMTHQ LWPKHRNAYA TMMYMGTPRD 60 YEFYVATRVL LRSLRSLSVN ADLVVIASLD VPPRWVQAME KEDGARVVSV ENVNNPYKDQ 120 SNFDHRFKLT LNKLYAWSLV DYERVVMLDA DNLFLRNTDE LFQCGQFCAA FINPCIFHTG 180 LFVLQPSNEV FKDMLHQLEV GKDNPDGADQ GFIGGYFPDL LDKPLFHPPA NGSVVAGGNP 240 DLRLRWNVPC GPNSVITFPG ASWLKPWYWW SWPVLPLGID WHEKRRQHLG YGAEMPMVVI 300 QSILYLGIIA VTRLARPNLT KLCYRGSSDK NIISSLQSGL KVLSLWAILA AYVTPFFLIP 360 CTLHPLLGWS LYLLGTFALC SVAINAFMLP TIHVLTPWIG IFGVLLVMAC PWYTNGVVRA 420 LSVFVYAFCA APVLWISSTK VVASLQVSLE REAFFPKLGE YSSPSSSSSS SSPRFGLNKL 480 C* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00176 | PLN00176 | 3.0e-6 | 83 | 236 | 191 | + galactinol synthase | ||
COG5597 | COG5597 | 7.0e-7 | 34 | 228 | 214 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
cd00505 | Glyco_transf_8 | 3.0e-10 | 120 | 217 | 125 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
pfam01501 | Glyco_transf_8 | 2.0e-11 | 55 | 219 | 199 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 4.0e-53 | 47 | 288 | 253 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67416.1 | 0 | 45 | 460 | 40 | 463 | OSIGBa0143N19.10 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC77769.1 | 0 | 45 | 460 | 40 | 463 | hypothetical protein OsI_16920 [Oryza sativa Indica Group] |
RefSeq | NP_565817.2 | 0 | 43 | 469 | 59 | 495 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
RefSeq | XP_002269578.1 | 0 | 23 | 465 | 19 | 466 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002528922.1 | 0 | 22 | 480 | 23 | 482 | glucosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 0.000000000001 | 69 | 217 | 22 | 172 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3u2x_A | 0.000000000001 | 69 | 217 | 22 | 172 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3u2v_B | 0.000000000001 | 69 | 217 | 22 | 172 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3u2v_A | 0.000000000001 | 69 | 217 | 22 | 172 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3u2u_B | 0.000000000001 | 69 | 217 | 22 | 172 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |