Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10008865 |
Family | CBM43 |
Protein Properties | Length: 445 Molecular Weight: 49274.4 Isoelectric Point: 7.733 |
Chromosome | Chromosome/Scaffold: 311 Start: 61006 End: 62340 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 358 | 440 | 2.9e-24 |
WCVSKEGADVRVLQRNIDYVCGTAAAMGSYWCRPIQEGGECFLPDTVGAHASFAMNAFYQAMGRNDYDCEFRQTGEITTVDPR | |||
GH17 | 26 | 339 | 0 |
IGVNYGDDLPPPSDVARFLLQSTLINRVRIFEPNPELIRAFAHTGIRLTLTIPNHQIPKLSANFTFAQQWLHSYVVPFLPPTNIVRILVGNEVFSPANKL LIDSLVPAMRTLHAALVQSSLDRRIQISTPHSLGILSDSSPPAGKFHRGYDIHILKPLVTFLRSTNSPFMINPYPFFGCCSDMASRDYALFRPNPGVLDD NRKLRYTNMLDAQLDAVFSAMKSLGFAGLEIAIPKTGWPSKGDPSQIGAGIENAALYNRNLIQHVNSGVGTPLMPNRSFETYIFGLFNEDRKPGPAYERS FGLFNPDLSPEYDV |
Full Sequence |
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Protein Sequence Length: 445 Download |
MAFNPPTFLT CLFILFPLIS GAEGSIGVNY GDDLPPPSDV ARFLLQSTLI NRVRIFEPNP 60 ELIRAFAHTG IRLTLTIPNH QIPKLSANFT FAQQWLHSYV VPFLPPTNIV RILVGNEVFS 120 PANKLLIDSL VPAMRTLHAA LVQSSLDRRI QISTPHSLGI LSDSSPPAGK FHRGYDIHIL 180 KPLVTFLRST NSPFMINPYP FFGCCSDMAS RDYALFRPNP GVLDDNRKLR YTNMLDAQLD 240 AVFSAMKSLG FAGLEIAIPK TGWPSKGDPS QIGAGIENAA LYNRNLIQHV NSGVGTPLMP 300 NRSFETYIFG LFNEDRKPGP AYERSFGLFN PDLSPEYDVR NLRPMVSRQS SENSPGKWCV 360 SKEGADVRVL QRNIDYVCGT AAAMGSYWCR PIQEGGECFL PDTVGAHASF AMNAFYQAMG 420 RNDYDCEFRQ TGEITTVDPR LCKP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-14 | 357 | 428 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-29 | 357 | 439 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-86 | 26 | 339 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23036.1 | 0 | 23 | 443 | 21 | 457 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271991.1 | 0 | 23 | 442 | 21 | 478 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318439.1 | 0 | 19 | 443 | 25 | 462 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321390.1 | 0 | 25 | 439 | 1 | 418 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526252.1 | 0 | 12 | 441 | 17 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 26 | 340 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 26 | 340 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 26 | 339 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 26 | 339 | 3 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 26 | 339 | 3 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |