| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10008881 |
| Family | CBM43 |
| Protein Properties | Length: 469 Molecular Weight: 51810.3 Isoelectric Point: 8.6873 |
| Chromosome | Chromosome/Scaffold: 311 Start: 139128 End: 140700 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 379 | 462 | 1.4e-27 |
| WCVVARGADMRSLGRELSYACSHGNKTCEALEPGKECYEPVSLIWHASYAFSSYWTQFRSQGATCHFNGLAVQTTRNPGHGSCH | |||
| GH17 | 29 | 352 | 0 |
| IGINYGRLGNDLPTPFRSIELIKSMQVSSVKLYDPNPEILKLLAGTKIQVSVTVPNQEIIGISQNRSLAVKWVQDNVLAYYPGTMIRFVLVGNEVLSRSS SEDVQIWIHLVPAMLRIKNIIKSHNILNIKVGTPLAMDVLQNTSPPSNATFRSDVSLTVMPQLLKFLNSTKSFFFIDAYPYFPWSENPTSSALDFALFKS KSNYTDPGSGLVYNNLLDQMLDSLFFAMNKLGYPDIRVSISETGWPHAGDIDQPGANTNNAAIYNRNVIRKMTAKPPIGTPAKPGVTIPTFIFSLYDENR KNGPGTERHWGLLRPDGTAIYDID | |||
| Full Sequence |
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| Protein Sequence Length: 469 Download |
| MATATTTYSF LLPLLALSAL VMGMDVPNIG INYGRLGNDL PTPFRSIELI KSMQVSSVKL 60 YDPNPEILKL LAGTKIQVSV TVPNQEIIGI SQNRSLAVKW VQDNVLAYYP GTMIRFVLVG 120 NEVLSRSSSE DVQIWIHLVP AMLRIKNIIK SHNILNIKVG TPLAMDVLQN TSPPSNATFR 180 SDVSLTVMPQ LLKFLNSTKS FFFIDAYPYF PWSENPTSSA LDFALFKSKS NYTDPGSGLV 240 YNNLLDQMLD SLFFAMNKLG YPDIRVSISE TGWPHAGDID QPGANTNNAA IYNRNVIRKM 300 TAKPPIGTPA KPGVTIPTFI FSLYDENRKN GPGTERHWGL LRPDGTAIYD IDLTGSRTDS 360 EYRALPEGRN NMAYKGKVWC VVARGADMRS LGRELSYACS HGNKTCEALE PGKECYEPVS 420 LIWHASYAFS SYWTQFRSQG ATCHFNGLAV QTTRNPGHGS CHFPNVTV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-14 | 379 | 450 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-29 | 379 | 463 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-106 | 29 | 352 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 29 | 468 | 37 | 476 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 27 | 468 | 27 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189019.1 | 0 | 29 | 468 | 37 | 476 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002298669.1 | 0 | 10 | 468 | 3 | 462 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520622.1 | 0 | 29 | 421 | 28 | 420 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 353 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 29 | 354 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 29 | 354 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 29 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 29 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
