| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10008903 |
| Family | GH33 |
| Protein Properties | Length: 335 Molecular Weight: 37122.4 Isoelectric Point: 6.7423 |
| Chromosome | Chromosome/Scaffold: 311 Start: 284353 End: 286646 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH33 | 17 | 311 | 2.7e-29 |
| FVANSAPFSSCHASTIVEVEKGHFLAAYFGGTSEGASDVKIWIQTYKDGVWQAPMIADEQPGVPLWNPVLFKLPSDEVLLFYKIGQEVQKWSGCMKRSYD KGVTWTLREQLPPGILGPSKNKPLLLETGLLLCGSSVESWNSWGSWVEVTADAGKTWRKYGPIYIENRSLSVIQPVPYRTTKGTLRVLMRSFDGIDRVCI SESLDGGVSWGYAKPTELPNPNSGIDGVKLRDGRVLLAYNTASRAVLKVAVSEDEGDSWCDVLTLEDQQGMEFSYPAVIQDSDGLVHITYTYKRT | |||
| Full Sequence |
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| Protein Sequence Length: 335 Download |
| MSKGCSPWSP LRAEFTFVAN SAPFSSCHAS TIVEVEKGHF LAAYFGGTSE GASDVKIWIQ 60 TYKDGVWQAP MIADEQPGVP LWNPVLFKLP SDEVLLFYKI GQEVQKWSGC MKRSYDKGVT 120 WTLREQLPPG ILGPSKNKPL LLETGLLLCG SSVESWNSWG SWVEVTADAG KTWRKYGPIY 180 IENRSLSVIQ PVPYRTTKGT LRVLMRSFDG IDRVCISESL DGGVSWGYAK PTELPNPNSG 240 IDGVKLRDGR VLLAYNTASR AVLKVAVSED EGDSWCDVLT LEDQQGMEFS YPAVIQDSDG 300 LVHITYTYKR TQIKVTTQWC LLCSLRNRMN LSNA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4692 | COG4692 | 4.0e-27 | 23 | 314 | 344 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 3.0e-90 | 38 | 304 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU18568.1 | 0 | 1 | 314 | 34 | 347 | unknown [Glycine max] |
| RefSeq | NP_851204.1 | 0 | 11 | 314 | 14 | 317 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | XP_002263578.1 | 0 | 10 | 314 | 58 | 362 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324495.1 | 0 | 1 | 314 | 1 | 314 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531744.1 | 0 | 1 | 314 | 1 | 314 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV137355 | 268 | 40 | 307 | 0 |
| EL689016 | 287 | 19 | 305 | 0 |
| EY114510 | 262 | 6 | 267 | 0 |
| DV145816 | 255 | 37 | 291 | 0 |
| ES962106 | 261 | 32 | 292 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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