Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10008974 |
Family | GH35 |
Protein Properties | Length: 1012 Molecular Weight: 112636 Isoelectric Point: 6.8812 |
Chromosome | Chromosome/Scaffold: 1486 Start: 285000 End: 291257 |
Description | beta-galactosidase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 162 | 260 | 2.6e-29 |
GFPVWLKYVPGMSFRTDNEPFKAAMQKFTEKIVNMMKQEQLFEPQGGPIILSQIENEYGPIEWELKAPGKAYAQWAAQMAVGLNTGVPWIACKQEDAPD | |||
GH35 | 39 | 133 | 0 |
IVNGQRRILIAGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRFDLVKFVKVVQQAGLYVNLRIGPYACAEWNFGYPF | |||
GH35 | 310 | 612 | 0 |
VVNGQRRILIAGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRFDLVKFVKVVQQAGLYVNLRIGPYACAEWNFGGFPVWLKY VPGMSFRTDNEPFKAAMQKFTEKIVNMMKQEELFEPQGGPIILSQIENEYGPIEWELKAPGKAYAQWAAQMAVGLNTGVPWIACKQEDAPDPLIDTCNAY YCEKFTPNKSYKPKMWTEAWTAWFTSWGNPVLYRPAEDQAFSVLKFIQSGGSYANYYMYHGGTNFGRTAGGPFVATSYDYDAPLDEYGLTNDPKYTHLKH MHK |
Full Sequence |
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Protein Sequence Length: 1012 Download |
MLSHSSLALF SLLLLLCSSS SLWVSPVTAT VTYDGKAIIV NGQRRILIAG SIHYPRSTPE 60 MWPDLIQKAK DGGLDVIQTY VFWNGHEPSP GNYYFEDRFD LVKFVKVVQQ AGLYVNLRIG 120 PYACAEWNFG YPFKVIPCSV SFSLYFLWVL NNALFFGHGC RGFPVWLKYV PGMSFRTDNE 180 PFKAAMQKFT EKIVNMMKQE QLFEPQGGPI ILSQIENEYG PIEWELKAPG KAYAQWAAQM 240 AVGLNTGVPW IACKQEDAPD PLVHIMGEPS AIQTSRGSGI FGSQVHPEWW FVRELLHVTA 300 AVTYDGKAIV VNGQRRILIA GSIHYPRSTP EMWPDLIQKA KDGGLDVIQT YVFWNGHEPS 360 PGNYYFEDRF DLVKFVKVVQ QAGLYVNLRI GPYACAEWNF GGFPVWLKYV PGMSFRTDNE 420 PFKAAMQKFT EKIVNMMKQE ELFEPQGGPI ILSQIENEYG PIEWELKAPG KAYAQWAAQM 480 AVGLNTGVPW IACKQEDAPD PLIDTCNAYY CEKFTPNKSY KPKMWTEAWT AWFTSWGNPV 540 LYRPAEDQAF SVLKFIQSGG SYANYYMYHG GTNFGRTAGG PFVATSYDYD APLDEYGLTN 600 DPKYTHLKHM HKAIKQSEKA LVSADATVTS LGTNQEAHVY SSSSGCAAFL ANYDVSYSVK 660 VNFGSGQYDL PAWSISILPD CKTEVYNTAK VRSSQETGKV LAPRVHKKMT PLGGFTWDSY 720 IDEVASGFAS DTTTEDGLWE QLYMTKDSSD YLWYMQDVKI GSDEAFLTNG KDPFLNVQSA 780 GHFLNVFVNG KLIGSAYGSN DNPKLTFSQS VKLNVGVNKI ALLSASVGLA NVGLHFENYN 840 VGVLGPVTLT GLNQGTVDMT KWKWSYKVGV QGEKLQLNTV AGSSSVEWVK GSMLAKKQPL 900 TWYKSTFNAP EGNDPVALDM ISMGKGQIWI NGQGIGRYWP AYTAQGNCGG CSYGGYFTEK 960 KCLTGCGQPT QRWYHVPRSW LKPTGNLLVV FEEWGGDPTG ISMVKRTLPG M* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 6.0e-21 | 302 | 610 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-88 | 37 | 263 | 231 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 5.0e-120 | 27 | 263 | 237 | + beta-galactosidase; Provisional | ||
pfam01301 | Glyco_hydro_35 | 3.0e-150 | 308 | 614 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 297 | 1008 | 715 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABY71826.1 | 0 | 24 | 263 | 21 | 229 | beta-galactosidase [Prunus salicina] |
GenBank | ABY71826.1 | 0 | 298 | 1006 | 24 | 724 | beta-galactosidase [Prunus salicina] |
RefSeq | XP_002308268.1 | 0 | 298 | 1007 | 24 | 725 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 23 | 264 | 22 | 232 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002514108.1 | 0 | 295 | 1007 | 23 | 727 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 5.00264e-43 | 308 | 610 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 3e-21 | 37 | 253 | 14 | 193 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.001 | 895 | 939 | 504 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-39 | 302 | 620 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 6e-24 | 31 | 220 | 11 | 167 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |