Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10009287 |
Family | CE8 |
Protein Properties | Length: 252 Molecular Weight: 27458.7 Isoelectric Point: 8.8844 |
Chromosome | Chromosome/Scaffold: 318 Start: 121935 End: 123005 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 26 | 251 | 0 |
FVVAKDGSGTHRSVNDAVEAAASGRRTSAERVVIHVKAGVYNERVEIPLHLKNLMLVGDDIDRTVITGSRNIPDGSTTYNSATFGNLCFGRPLLGEGHHV ENTAAPQKHQAVALRVNSDQAFFYRCSFRGYHDTLFVHSLRQFYGDCHIYGTIDFIFGDASAVLQNCDIFARKPLRGQANFITAQGREDANQNTGISIQG SRVRPATDFAGSSSIRSYLGRPWKEY |
Full Sequence |
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Protein Sequence Length: 252 Download |
MAPQANISSN VGLLMSWTSA TSKANFVVAK DGSGTHRSVN DAVEAAASGR RTSAERVVIH 60 VKAGVYNERV EIPLHLKNLM LVGDDIDRTV ITGSRNIPDG STTYNSATFG NLCFGRPLLG 120 EGHHVENTAA PQKHQAVALR VNSDQAFFYR CSFRGYHDTL FVHSLRQFYG DCHIYGTIDF 180 IFGDASAVLQ NCDIFARKPL RGQANFITAQ GREDANQNTG ISIQGSRVRP ATDFAGSSSI 240 RSYLGRPWKE Y* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03043 | PLN03043 | 5.0e-84 | 27 | 251 | 226 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02713 | PLN02713 | 1.0e-92 | 27 | 251 | 226 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-96 | 14 | 251 | 239 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-117 | 25 | 251 | 228 | + Pectinesterase. | ||
PLN02916 | PLN02916 | 3.0e-120 | 3 | 251 | 250 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB82677.1 | 0 | 10 | 251 | 180 | 407 | pectinesterase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191632.2 | 0 | 10 | 251 | 190 | 430 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q84R10 | 0 | 10 | 251 | 190 | 430 | PME36_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 36; Includes: RecName: Full=Pectinesterase inhibitor 36; AltName: Full=Pectin methylesterase inhibitor 36; Includes: RecName: Full=Pectinesterase 36; Short=PE 36; AltName: Full=Pectin methylesterase 36; Short=AtPME36; Flags: Precursor |
RefSeq | XP_002301275.1 | 0 | 10 | 251 | 1 | 242 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511680.1 | 0 | 10 | 251 | 143 | 383 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 19 | 251 | 2 | 230 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 24 | 251 | 3 | 226 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-22 | 25 | 248 | 5 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-22 | 25 | 248 | 5 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-22 | 25 | 248 | 5 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FG572163 | 218 | 12 | 229 | 0 |
GH171028 | 233 | 24 | 251 | 0 |
EH038845 | 229 | 24 | 251 | 0 |
DR094467 | 239 | 14 | 251 | 0 |
EL452439 | 239 | 14 | 251 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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