Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10009556 |
Family | GT1 |
Protein Properties | Length: 565 Molecular Weight: 62949.4 Isoelectric Point: 6.6764 |
Chromosome | Chromosome/Scaffold: 1331 Start: 192297 End: 195937 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 118 | 525 | 0 |
IVGTRGDVQPFAAIGQRLQEDGHRVRLATHSNFKDFVLDAGLEFFPLGGDAQLLARFMVKNKGFFPSDPSEIPIQRQQMREIIFSLSAACTDPDPDTKVR FKAEAIIANPPTYGHTHVAEALKVPLHVMFTMPWTATNEFPHPFTRVKQPAAYRLSYQIIDALVWIGIGNLISEYRKKHLKLRPVTYLSGSHSSRMELPF CYIWSPHLVPKPKDWGPKLDIVGFCFLDLVTNYEPPTALKDWLGSGDAPIYIGFGSLPVQEPEKMTEVIIKALELTGQRGILNKGWGGLGNLAKPNKNVY SLDSCPHDWLFFRCKAVVHHGGAGTTAAGLRAACPTAIVPFFGDQFFWGEQVHARGVGPSPIPVEDFSTEKLVCAIEYMLDPMVKQRAVDLAKAMEKEDG VTGAVKAF |
Full Sequence |
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Protein Sequence Length: 565 Download |
MLRSIAQLCA GVGGNSRESD TSSSYQPKDV KSGEFETLDD ALEEELLHEK LAMETKLKLY 60 NRLAKIQEDG TVRFEVPGDI EPRSLELQPL VYSEAVEEDS VDTEVMKDIP PLQIVILIVG 120 TRGDVQPFAA IGQRLQEDGH RVRLATHSNF KDFVLDAGLE FFPLGGDAQL LARFMVKNKG 180 FFPSDPSEIP IQRQQMREII FSLSAACTDP DPDTKVRFKA EAIIANPPTY GHTHVAEALK 240 VPLHVMFTMP WTATNEFPHP FTRVKQPAAY RLSYQIIDAL VWIGIGNLIS EYRKKHLKLR 300 PVTYLSGSHS SRMELPFCYI WSPHLVPKPK DWGPKLDIVG FCFLDLVTNY EPPTALKDWL 360 GSGDAPIYIG FGSLPVQEPE KMTEVIIKAL ELTGQRGILN KGWGGLGNLA KPNKNVYSLD 420 SCPHDWLFFR CKAVVHHGGA GTTAAGLRAA CPTAIVPFFG DQFFWGEQVH ARGVGPSPIP 480 VEDFSTEKLV CAIEYMLDPM VKQRAVDLAK AMEKEDGVTG AVKAFYKHFP VKKIESAEQP 540 DRDGLKMNKS SCSKFSFRRF LQLK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1819 | COG1819 | 4.0e-30 | 114 | 523 | 423 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
pfam03033 | Glyco_transf_28 | 1.0e-32 | 114 | 258 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
cd03784 | GT1_Gtf_like | 9.0e-114 | 114 | 528 | 419 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC22617.1 | 0 | 45 | 553 | 93 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
EMBL | CBI37267.1 | 0 | 45 | 540 | 104 | 600 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265023.1 | 0 | 45 | 540 | 151 | 647 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512608.1 | 0 | 16 | 536 | 55 | 575 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
RefSeq | XP_002521125.1 | 0 | 45 | 535 | 113 | 604 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 5e-27 | 112 | 523 | 1 | 375 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3h4i_A | 5e-27 | 112 | 523 | 1 | 375 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1rrv_B | 7e-19 | 112 | 517 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 7e-19 | 112 | 517 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1iir_A | 1e-18 | 112 | 523 | 1 | 392 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT046352 | 335 | 121 | 455 | 0 |
GO883166 | 332 | 82 | 407 | 0 |
HO626576 | 428 | 107 | 530 | 0 |
CX664063 | 295 | 211 | 505 | 0 |
GT046352 | 32 | 448 | 479 | 0.16 |
Sequence Alignments (This image is cropped. Click for full image.) |
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