Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10009557 |
Family | GT1 |
Protein Properties | Length: 281 Molecular Weight: 31130.9 Isoelectric Point: 7.0028 |
Chromosome | Chromosome/Scaffold: 1331 Start: 197220 End: 198968 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT1 | 119 | 263 | 2.2e-38 |
PEKMTQMIVKALELTGQRGIINKGWGGLGNLAEPKDSIYLLDNCPHDWLFLRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGVGPAP IPVDEFSTEKLVEAIKYMVEPEVKQRAVEIGKAMENEDGVAGAVR |
Full Sequence |
---|
Protein Sequence Length: 281 Download |
MSRSWLLTIS RVGSKEYLLS QNIPVQRQQM REIIFSLLPA CQDPDPETNI PFRAEAIIAN 60 PPAYGHTHVA EALKVPLHVI FTMPWTPTTT EFPHPMSRVK QPVANRVSTL YLQQLVQEPE 120 KMTQMIVKAL ELTGQRGIIN KGWGGLGNLA EPKDSIYLLD NCPHDWLFLR CKAVVHHGGA 180 GTTAAGLKAA CPTTIVPFFG DQPFWGDRVH ARGVGPAPIP VDEFSTEKLV EAIKYMVEPE 240 VKQRAVEIGK AMENEDGVAG AVRGFYKHFP LKKTEEEEAC * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03033 | Glyco_transf_28 | 2.0e-7 | 26 | 89 | 64 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
cd03784 | GT1_Gtf_like | 3.0e-9 | 18 | 99 | 82 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
COG1819 | COG1819 | 5.0e-12 | 120 | 263 | 145 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
cd03784 | GT1_Gtf_like | 7.0e-41 | 116 | 263 | 148 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD39328.2 | 0 | 116 | 275 | 125 | 284 | OSJNBb0080H08.20 [Oryza sativa (japonica cultivar-group)] |
GenBank | EEE60429.1 | 0 | 116 | 275 | 114 | 273 | hypothetical protein OsJ_13634 [Oryza sativa Japonica Group] |
RefSeq | XP_002321244.1 | 0 | 116 | 273 | 370 | 527 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521125.1 | 2e-35 | 12 | 116 | 245 | 350 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
RefSeq | XP_002521125.1 | 0 | 116 | 277 | 445 | 606 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 1e-18 | 119 | 255 | 234 | 368 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 3h4i_A | 1e-18 | 119 | 255 | 234 | 368 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1iir_A | 6e-16 | 119 | 263 | 251 | 392 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 1rrv_B | 0.00000000000003 | 123 | 245 | 256 | 376 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 0.00000000000003 | 123 | 245 | 256 | 376 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FG162240 | 182 | 97 | 278 | 0 |
CO982303 | 162 | 116 | 277 | 0 |
CX703897 | 162 | 116 | 277 | 0 |
GR112540 | 162 | 116 | 277 | 0 |
GT040776 | 161 | 116 | 276 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|