| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10009645 |
| Family | AA1 |
| Protein Properties | Length: 599 Molecular Weight: 66479.5 Isoelectric Point: 7.6419 |
| Chromosome | Chromosome/Scaffold: 169 Start: 199526 End: 202786 |
| Description | laccase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 34 | 585 | 0 |
| TTRRFHFNVEWKKVSRLCKTRQLLTVNGEFPGPTIAVNEGDHVEIKVTNGVSKNTTIHWHGVRQIRTGWADGPAYITQCPIQAGGSYMYKFTVAEQRGTL LWHAHYGWQRASVYGAFIIYPRLSYPFLVPNQPIQAEIPIIFGEWWDREEDALEKAMLSTGAGPSISLAYTINGLPGPLYPCSNKDTFMATVEYGKTYML RVINAALADELFFSISKHTLTVVEVDALYTKPFATEAIMIAPGQTTTLLITADQVPGPTGAFVMAATPYVTSVFPFNNSTTIGFLRYNDSTRTQDLSTLL SGGHHHVVGPENLPKMEDTDFTMKFAGKIRSLGSREYPCEVPKNIDKRVIIAISLNLQDCPQNKTCSGYQGKMFYASMNNQSFVRPPTSFLQTHYLIGSS DRNSSNPFPERPPNSFNYTGGDPQTTNPNTEFGSKMMVVPYGTRVEIVLQGTNILNVENHPIHIHGHNFFIVGTGFGNFNESKDPSEYNLVDPPSRNTIA SRNTRAVPSGGWAAIRINADNPGVWFIHCHLEPHTSWGLATGFVVQDGPLPS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 599 Download |
| MEGFYRRHQQ QLLTLALVAI IVASWAQPCY STTTTRRFHF NVEWKKVSRL CKTRQLLTVN 60 GEFPGPTIAV NEGDHVEIKV TNGVSKNTTI HWHGVRQIRT GWADGPAYIT QCPIQAGGSY 120 MYKFTVAEQR GTLLWHAHYG WQRASVYGAF IIYPRLSYPF LVPNQPIQAE IPIIFGEWWD 180 REEDALEKAM LSTGAGPSIS LAYTINGLPG PLYPCSNKDT FMATVEYGKT YMLRVINAAL 240 ADELFFSISK HTLTVVEVDA LYTKPFATEA IMIAPGQTTT LLITADQVPG PTGAFVMAAT 300 PYVTSVFPFN NSTTIGFLRY NDSTRTQDLS TLLSGGHHHV VGPENLPKME DTDFTMKFAG 360 KIRSLGSREY PCEVPKNIDK RVIIAISLNL QDCPQNKTCS GYQGKMFYAS MNNQSFVRPP 420 TSFLQTHYLI GSSDRNSSNP FPERPPNSFN YTGGDPQTTN PNTEFGSKMM VVPYGTRVEI 480 VLQGTNILNV ENHPIHIHGH NFFIVGTGFG NFNESKDPSE YNLVDPPSRN TIASRNTRAV 540 PSGGWAAIRI NADNPGVWFI HCHLEPHTSW GLATGFVVQD GPLPSQRLLP PPNDFPAC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 7.0e-50 | 41 | 157 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02604 | PLN02604 | 6.0e-76 | 35 | 585 | 590 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 2.0e-77 | 31 | 577 | 585 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 3.0e-96 | 35 | 588 | 590 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 35 | 598 | 570 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF78389.1 | 0 | 42 | 598 | 30 | 576 | AC069551_22 T10O22.11 [Arabidopsis thaliana] |
| RefSeq | NP_173252.2 | 0 | 28 | 598 | 21 | 581 | LAC1 (Laccase 1); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002281603.1 | 0 | 1 | 598 | 1 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002317883.1 | 0 | 15 | 598 | 10 | 579 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322091.1 | 0 | 28 | 598 | 23 | 579 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 33 | 588 | 1 | 536 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1asq_A | 0 | 33 | 588 | 1 | 536 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1asp_B | 0 | 33 | 588 | 1 | 536 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1asp_A | 0 | 33 | 588 | 1 | 536 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1aso_B | 0 | 33 | 588 | 1 | 536 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
