Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10009794 |
Family | GH9 |
Protein Properties | Length: 486 Molecular Weight: 54071.5 Isoelectric Point: 6.7747 |
Chromosome | Chromosome/Scaffold: 1 Start: 53368 End: 55872 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 28 | 474 | 0 |
DYKDALTKSLIFLEAQRSGKLPPTNRLPWRGDSALDDGKVENVDLVGGYYDAGDNVKYGLPMAFTVTTLAMNAVFYHEELQQTGEWQNTMDAIKWGTDFF LKASSKRNKLYVQVGDPVKDHQCWVRPENMQTPRPVLQIHENDPGSEIAAEVAAAFASSSMVFRSVNKTYARLLLNKAKKMFLFAKSHKATFDGECPFYC SFSGYNDELMWGATWLYMATRNETYLKYLKEDAISGCVAEFSWDLKYAGVHILLAKLFFEGEKSFEQYKGQADSFICSNLPESPYHQVRITPGGMIHLRD GANSQYVTGTANLFAIYSDILRQFNQKVCCGPKQFDAEALLGFARQQMDYLLGNNPEKRSYMVGFGNNPPVQAHHRGASIPCTAPADVSCPMSFVEYFNK DTPNPNELTGAILGGPDKNDKFVDKRWESVYTEPCTYVNSLAVGALA |
Full Sequence |
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Protein Sequence Length: 486 Download |
MAMRSYVAAA IIVIAVATSF VCVNAHFDYK DALTKSLIFL EAQRSGKLPP TNRLPWRGDS 60 ALDDGKVENV DLVGGYYDAG DNVKYGLPMA FTVTTLAMNA VFYHEELQQT GEWQNTMDAI 120 KWGTDFFLKA SSKRNKLYVQ VGDPVKDHQC WVRPENMQTP RPVLQIHEND PGSEIAAEVA 180 AAFASSSMVF RSVNKTYARL LLNKAKKMFL FAKSHKATFD GECPFYCSFS GYNDELMWGA 240 TWLYMATRNE TYLKYLKEDA ISGCVAEFSW DLKYAGVHIL LAKLFFEGEK SFEQYKGQAD 300 SFICSNLPES PYHQVRITPG GMIHLRDGAN SQYVTGTANL FAIYSDILRQ FNQKVCCGPK 360 QFDAEALLGF ARQQMDYLLG NNPEKRSYMV GFGNNPPVQA HHRGASIPCT APADVSCPMS 420 FVEYFNKDTP NPNELTGAIL GGPDKNDKFV DKRWESVYTE PCTYVNSLAV GALAKLAGCS 480 PPPHH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 6.0e-153 | 18 | 478 | 477 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 7.0e-158 | 28 | 474 | 461 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 1.0e-160 | 25 | 477 | 465 | + endoglucanase | ||
PLN02613 | PLN02613 | 6.0e-172 | 28 | 478 | 455 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 21 | 477 | 458 | + Endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN82881.1 | 0 | 27 | 477 | 13 | 464 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 1 | 470 | 3 | 475 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 27 | 479 | 516 | 969 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189972.2 | 0 | 19 | 477 | 24 | 484 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002516149.1 | 0 | 24 | 477 | 27 | 481 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 27 | 476 | 3 | 428 | A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene At2g37210 |
PDB | 1ksc_A | 0 | 27 | 476 | 3 | 428 | A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene At2g37210 |
PDB | 1ks8_A | 0 | 27 | 476 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 27 | 476 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 27 | 476 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |