| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10009841 |
| Family | AA1 |
| Protein Properties | Length: 494 Molecular Weight: 54196.4 Isoelectric Point: 6.837 |
| Chromosome | Chromosome/Scaffold: 546 Start: 184625 End: 186833 |
| Description | laccase 12 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 10 | 479 | 0 |
| SHGVRQMRTGWSDGPEYVTQCPIQPGGSYTYRFTIREQEGTLWWHAHSSWLRATVYGALIIHPKHGAPFPFPKPARQSTLMLGEWWNANPVDVVREATRT GTAPNISDAYTINGQPGDLYNCSSEDTAVVPIAAGETNLLRVINSAMNQPLFFTIANHKFTVVGADASYVKPFTTSVMMLGPGQTTDVLISGDQTPGRYY MAARAYQSAQNASFDTTTTTAILQYNNSSNSTKLPIMPRLPAFNDTATVTAFSASFKSKEKALVPKEIDENLFFTVGLGLNNCPPNFNASERCQGPNGTR FTASMNNVSFVLPSNFSLLEAHKLNVGGVFTSDFPARPPQAFDYTGNVSRSLWQPMSGTRLYKLKYGSRVQVVLQGTSIVTPENHPIHLHGYDFYILAEG FGNFDPKTDTSKFNLVDPPLRNTAAVPVNGWSVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVEDGIGK | |||
| Full Sequence |
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| Protein Sequence Length: 494 Download |
| MSTLMSINLS HGVRQMRTGW SDGPEYVTQC PIQPGGSYTY RFTIREQEGT LWWHAHSSWL 60 RATVYGALII HPKHGAPFPF PKPARQSTLM LGEWWNANPV DVVREATRTG TAPNISDAYT 120 INGQPGDLYN CSSEDTAVVP IAAGETNLLR VINSAMNQPL FFTIANHKFT VVGADASYVK 180 PFTTSVMMLG PGQTTDVLIS GDQTPGRYYM AARAYQSAQN ASFDTTTTTA ILQYNNSSNS 240 TKLPIMPRLP AFNDTATVTA FSASFKSKEK ALVPKEIDEN LFFTVGLGLN NCPPNFNASE 300 RCQGPNGTRF TASMNNVSFV LPSNFSLLEA HKLNVGGVFT SDFPARPPQA FDYTGNVSRS 360 LWQPMSGTRL YKLKYGSRVQ VVLQGTSIVT PENHPIHLHG YDFYILAEGF GNFDPKTDTS 420 KFNLVDPPLR NTAAVPVNGW SVIRFVADNP GVWLMHCHLD VHITWGLAMA FLVEDGIGKL 480 EAIEPPPEDL PIC* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 3.0e-43 | 342 | 476 | 140 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 2.0e-55 | 11 | 480 | 500 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-67 | 11 | 479 | 502 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 7.0e-76 | 11 | 490 | 513 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 11 | 493 | 487 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92474.1 | 0 | 11 | 493 | 66 | 550 | unknown [Populus trichocarpa] |
| RefSeq | XP_002312186.1 | 0 | 11 | 493 | 90 | 574 | laccase 90a [Populus trichocarpa] |
| RefSeq | XP_002315130.1 | 0 | 11 | 493 | 94 | 582 | laccase 90d [Populus trichocarpa] |
| RefSeq | XP_002315131.1 | 0 | 11 | 493 | 91 | 575 | laccase 90c [Populus trichocarpa] |
| RefSeq | XP_002520797.1 | 0 | 11 | 493 | 94 | 581 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 11 | 483 | 62 | 531 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asq_A | 0 | 11 | 483 | 62 | 531 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asp_B | 0 | 11 | 483 | 62 | 531 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asp_A | 0 | 11 | 483 | 62 | 531 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1aso_B | 0 | 11 | 483 | 62 | 531 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797675 | 490 | 11 | 494 | 0 |
| DY297248 | 343 | 136 | 472 | 0 |
| DW243722 | 282 | 178 | 454 | 0 |
| FC900507 | 291 | 136 | 421 | 0 |
| EX274037 | 313 | 170 | 477 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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