Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10010015 |
Family | GH3 |
Protein Properties | Length: 782 Molecular Weight: 83504.3 Isoelectric Point: 8.6224 |
Chromosome | Chromosome/Scaffold: 1630 Start: 295492 End: 299604 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 84 | 330 | 0 |
GVPRLGVKEYEWWSEALHGVSDVGPGTKFGGKFPGATSFPQVITTAASFNATLWEAIGKVVSDEARAMYNGGAGGLTYWSPNVNVVRDPRWGRAQETPGE DPLVVGTYAASYVRGLQGNDGERLKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDMEDTFNVPFKMCVKNGKVASVMCSYNQVNGVPTCADPNLLRKT VRGQWGLDGYIVSDCDSVGVYYNTQHYTSTPEEAAAVAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 782 Download |
MATNNINLIL PLVHLLLLAA PPASFAAGIA RRPPTLFACD PSNDTSKSLG FCQTKLGIKE 60 RVKDLIGRLT LKEKVGLLVN NAGGVPRLGV KEYEWWSEAL HGVSDVGPGT KFGGKFPGAT 120 SFPQVITTAA SFNATLWEAI GKVVSDEARA MYNGGAGGLT YWSPNVNVVR DPRWGRAQET 180 PGEDPLVVGT YAASYVRGLQ GNDGERLKVA ACCKHFTAYD LDNWNGVDRF HFNAKVSKQD 240 MEDTFNVPFK MCVKNGKVAS VMCSYNQVNG VPTCADPNLL RKTVRGQWGL DGYIVSDCDS 300 VGVYYNTQHY TSTPEEAAAV AIKAGLDLDC GPFLGTYTEN AVKSGLVTES EVDGALANTL 360 TVQMRLGMFE PSDQKYGNLG SADVCTPAHQ GLALEAARQG IVLLKNRRFG LPLSVTTHRN 420 VAVIGPNSNA TVTMIGNYAG VACGYTSPLQ GISAYAKSTI HEQGCADVAC VDDKLFGSAV 480 DAASHADATI LVMGLDQSIE AEFRDRDGLL LPGRQQELVS RVAAASRGPT ILVLMSGGPI 540 DVSFATNDPK ISGIIWAGYP GQAGGAAIAD ILFGTTNPGG KLPMTWYPQE YLTNLPMTEM 600 GMRAIDSNGY PGRTYRFYKG PVVYPFGHGL SYTTFVENIA TAPTTVQVPL HGHRNPNNTV 660 LNKAIKVTHV RCGKLSIGIE ADVKNTGRAD GTHTLLIYSS SPRASTAKGW APHKQLIAFR 720 KVHLAAGAGQ RVKINIHVCK YLSVVDRVGT RRIPMGTHSI HVGNVQHLVS LQAITLGVIK 780 N* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-55 | 122 | 465 | 349 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-61 | 63 | 362 | 307 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 7.0e-62 | 401 | 634 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-81 | 122 | 736 | 674 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 37 | 773 | 760 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 37 | 781 | 25 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 37 | 781 | 30 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 12 | 781 | 12 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316021.1 | 0 | 30 | 773 | 24 | 761 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 37 | 781 | 28 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 120 | 736 | 91 | 696 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3u48_A | 0 | 120 | 736 | 91 | 696 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3u4a_B | 0 | 120 | 736 | 91 | 696 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3u4a_A | 0 | 120 | 736 | 91 | 696 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2x41_A | 2e-40 | 60 | 738 | 2 | 676 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |