| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10010160 |
| Family | GH27 |
| Protein Properties | Length: 411 Molecular Weight: 44902.7 Isoelectric Point: 6.1122 |
| Chromosome | Chromosome/Scaffold: 587 Start: 75148 End: 77818 |
| Description | alpha-galactosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 142 | 321 | 0 |
| TQPGSLGYEEQDAKTFASWGIDYLKYDNCFNDGSKPTVRYPVMTHALLKAGRPIYFSLCEWGDLHPAEWGFNVGNSWRTTNDISDSWESMISKADENEVH AQHARPGGWNDPDMLEVGNGGMTDNEYVVHFSLWAISKSPLLLGFDVSNAYTIRSVLRIVGNKEAIGINQDPLGIQAKKV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 411 Download |
| MGGSSTIAGE LVAVLVLLSS SSWWSSLPAV AAADRRSLIA NGLGMTPPMG WNSWNHFHCN 60 ISETTIKATA DALVSSGLAR LGYTYVNIDD CWAEKSRDSK GNLRPKKSTF PSGIKALADY 120 VHSKGLKLGI YSDAGYYTCS KTQPGSLGYE EQDAKTFASW GIDYLKYDNC FNDGSKPTVR 180 YPVMTHALLK AGRPIYFSLC EWGDLHPAEW GFNVGNSWRT TNDISDSWES MISKADENEV 240 HAQHARPGGW NDPDMLEVGN GGMTDNEYVV HFSLWAISKS PLLLGFDVSN AYTIRSVLRI 300 VGNKEAIGIN QDPLGIQAKK VRMEGNKEIW AGPLRDYRFA VLLLNRANYE DGSDDLLTAL 360 WEDVGIPTGA VVEARDVWEG KTLGEVFGGG NITARVPARS CKLYILKPVA * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03231 | PLN03231 | 5.0e-20 | 47 | 315 | 354 | + putative alpha-galactosidase; Provisional | ||
| pfam02065 | Melibiase | 1.0e-26 | 35 | 285 | 318 | + Melibiase. | ||
| PLN02229 | PLN02229 | 1.0e-159 | 41 | 409 | 372 | + alpha-galactosidase | ||
| PLN02692 | PLN02692 | 0 | 35 | 410 | 376 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 0 | 35 | 408 | 374 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM13199.1 | 0 | 35 | 410 | 42 | 410 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_196455.1 | 0 | 35 | 410 | 42 | 410 | AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002270791.1 | 0 | 35 | 410 | 40 | 408 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316426.1 | 0 | 35 | 410 | 1 | 369 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513158.1 | 0 | 35 | 410 | 44 | 412 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 41 | 408 | 3 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 41 | 403 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 39 | 410 | 1 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 39 | 410 | 1 | 388 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 3lrl_A | 0 | 41 | 379 | 24 | 395 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
