Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10010170 |
Family | CE8 |
Protein Properties | Length: 919 Molecular Weight: 101866 Isoelectric Point: 9.6375 |
Chromosome | Chromosome/Scaffold: 587 Start: 113694 End: 120036 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 124 | 324 | 0 |
VREQCRTEKHQAVALRSDSGLSVYYRVEVRGYQDTLYTHTMRQFYRDSVIRGTIDFIFGYSAAVFQNCSLLARKGLDKQKNTITAHGRKDPKEPTGYTIQ FCKIEADSDLVPYINSAYTYLGRPWKNFSTTVVMQSYIGEAVRPERWLEWNGPMFLDTLYYDEFRNHGPGAATTLRVTWPGYQSLNSSSAADNFTGGQFI G | |||
CE8 | 606 | 900 | 0 |
AVVAKDGSGNFTSIMDAVAAAPDYSMKRFVVYIKAGVYQEYVEIKKKKWNLIMIGDGINRTVITGNRNFIDGWTTFRTATFAVSGRGFIARDLTIENSSG PEKHQAVALRSDSDLSVYYRIEVRGYQDTLYTHTMRQFYRDCVIKGTVDFIFGNAAAVFQNCSLLARKGLDNQKNTITAHGKKDPNQSTGYSIQFCNIGA DSDLASYGNTSYTYLGRPWKNFSTTVVMQSYIGEAVRPEGWLEWNGPMFLDTLYYGEFMNHGPGASMGRRVTWPGYHALNSSAAAANFTGGQVIE |
Full Sequence |
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Protein Sequence Length: 919 Download |
MAERRNGESG HMHRRIRRSK LHPQIARRKS TSNITSSIQQ LLTNVDIAKK KPASSNSRNF 60 PSWVRRQDRR KLLALTNGGL TVDAVVAKDG SGIFTSIMDA VAAAPDYRMK RCERERIHNK 120 RHDVREQCRT EKHQAVALRS DSGLSVYYRV EVRGYQDTLY THTMRQFYRD SVIRGTIDFI 180 FGYSAAVFQN CSLLARKGLD KQKNTITAHG RKDPKEPTGY TIQFCKIEAD SDLVPYINSA 240 YTYLGRPWKN FSTTVVMQSY IGEAVRPERW LEWNGPMFLD TLYYDEFRNH GPGAATTLRV 300 TWPGYQSLNS SSAADNFTGG QFIGGNLWLP STGIGYIEGL GESGYYPHHL QTILRFHFPA 360 EFCRNRVLAS LLCFTHLQKS RVMQKQSTSS VLLVLLLVIV LPAVSTAAAQ SSVAYSRNRG 420 GGSSSQYYQN QCLKVPISQF LSSLEGILEI IKDVNSIISN FGGGGGFFGG SRLTNAISDC 480 LDLLDLSADV LSWSISASKS PKGTKNNSTG DMSHDLKTWL SAAMANPDTC IEGFEGTNTI 540 LKSLVAGGLS DITSSVQQLL TDVDSPNKKS LPAGSNLEGD KFPSWVQRQD RRKLMALTVN 600 GLTVDAVVAK DGSGNFTSIM DAVAAAPDYS MKRFVVYIKA GVYQEYVEIK KKKWNLIMIG 660 DGINRTVITG NRNFIDGWTT FRTATFAVSG RGFIARDLTI ENSSGPEKHQ AVALRSDSDL 720 SVYYRIEVRG YQDTLYTHTM RQFYRDCVIK GTVDFIFGNA AAVFQNCSLL ARKGLDNQKN 780 TITAHGKKDP NQSTGYSIQF CNIGADSDLA SYGNTSYTYL GRPWKNFSTT VVMQSYIGEA 840 VRPEGWLEWN GPMFLDTLYY GEFMNHGPGA SMGRRVTWPG YHALNSSAAA ANFTGGQVIE 900 GNLWLPSTGV RYSAGFQQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 3.0e-5 | 83 | 111 | 29 | + Pectinesterase. | ||
pfam01095 | Pectinesterase | 1.0e-105 | 131 | 326 | 196 | + Pectinesterase. | ||
PLN02201 | PLN02201 | 3.0e-112 | 131 | 340 | 210 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 423 | 915 | 501 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 605 | 902 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 30 | 340 | 156 | 526 | unknown [Populus trichocarpa] |
GenBank | ABK92470.1 | 0 | 429 | 917 | 41 | 527 | unknown [Populus trichocarpa] |
Swiss-Prot | Q43062 | 0 | 429 | 916 | 45 | 520 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 30 | 340 | 148 | 518 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326321.1 | 0 | 429 | 917 | 33 | 519 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 602 | 916 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1xg2_A | 0 | 132 | 340 | 107 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 605 | 916 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1gq8_A | 0 | 83 | 340 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 9e-24 | 603 | 824 | 3 | 245 | A Chain A, Pectin Methylesterase From Carrot |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV233766 | 272 | 646 | 917 | 0 |
CV233766 | 209 | 132 | 340 | 0 |
DY290214 | 375 | 534 | 896 | 0 |
DY290214 | 190 | 131 | 320 | 0 |
EX673765 | 290 | 629 | 916 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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