Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10010201 |
Family | CBM49 |
Protein Properties | Length: 627 Molecular Weight: 69384.4 Isoelectric Point: 8.3097 |
Chromosome | Chromosome/Scaffold: 587 Start: 246683 End: 249530 |
Description | glycosyl hydrolase 9C1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM49 | 535 | 613 | 2.2e-29 |
AFLHSITQSWTVGTTTYYRHKVTIKNMSQKPITSIKLVAQNLLGSIWGLTPAPEKDTYVLPEWVKVLQPGSEINFVYVQ | |||
GH9 | 33 | 494 | 0 |
DYGDALDKTFLFLEAQRSGKLPLTDQRVKWRGDSGLRDGHLQGVDLVGGYYDAGDHVKFGLPMAFSVTMMAWGAVDFEKDIVLTDQMGNTLRAIRWGTDY FLKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTSRTSYKLDQNNPGSDLAGETAAALAASALAFKPYNSSYSNLLLAHAKQLFSFADRFRGLYDDSIQNA KQFYTSSGYSDELLWAATWLYRATSDEYYLKYCADNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGGQYTQTLKQYQAKADYFACACVQKNDGY NIHKTPGGLMYVREWNNMQYVSAAAFLTAVYSQYLTASNAKLTCPRGQLVEPRELLGFAKSQADYILGKNPKSISYMVGYGQQYPIHVHHRGASIASIFL LRSSVECVQGFETWYRKADANPNVVYGALVGGPDQNDNFSDQRANYEQTEPTLTASAPLIGL |
Full Sequence |
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Protein Sequence Length: 627 Download |
MKNKFNISPS AAAAICNLLL CSHMVLGLAQ GLDYGDALDK TFLFLEAQRS GKLPLTDQRV 60 KWRGDSGLRD GHLQGVDLVG GYYDAGDHVK FGLPMAFSVT MMAWGAVDFE KDIVLTDQMG 120 NTLRAIRWGT DYFLKAHTQP NVLWAQVGDG DSDHYCWERA EDMTTSRTSY KLDQNNPGSD 180 LAGETAAALA ASALAFKPYN SSYSNLLLAH AKQLFSFADR FRGLYDDSIQ NAKQFYTSSG 240 YSDELLWAAT WLYRATSDEY YLKYCADNAV YMGGTGWAVK EFSWDNKYAG VQILLSKILL 300 EGRGGQYTQT LKQYQAKADY FACACVQKND GYNIHKTPGG LMYVREWNNM QYVSAAAFLT 360 AVYSQYLTAS NAKLTCPRGQ LVEPRELLGF AKSQADYILG KNPKSISYMV GYGQQYPIHV 420 HHRGASIASI FLLRSSVECV QGFETWYRKA DANPNVVYGA LVGGPDQNDN FSDQRANYEQ 480 TEPTLTASAP LIGLFSKLQS ASGNRGYQPK ASPVTHYTKP TPAPKTVTGS HVPLAFLHSI 540 TQSWTVGTTT YYRHKVTIKN MSQKPITSIK LVAQNLLGSI WGLTPAPEKD TYVLPEWVKV 600 LQPGSEINFV YVQGGPQAKF SVLSYQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02340 | PLN02340 | 0 | 12 | 626 | 615 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 10 | 625 | 633 | + endoglucanase | ||
PLN02420 | PLN02420 | 0 | 31 | 517 | 489 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 14 | 498 | 485 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 33 | 496 | 466 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005576 | extracellular region |
GO:0005975 | carbohydrate metabolic process |
GO:0030246 | carbohydrate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27137.1 | 0 | 32 | 626 | 28 | 615 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_175323.1 | 0 | 33 | 625 | 30 | 626 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002277177.1 | 0 | 38 | 626 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310080.1 | 0 | 28 | 625 | 22 | 610 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002527135.1 | 0 | 29 | 626 | 24 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 33 | 482 | 4 | 412 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1ksc_A | 0 | 33 | 482 | 4 | 412 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1ks8_A | 0 | 33 | 482 | 4 | 412 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 32 | 498 | 24 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 32 | 565 | 4 | 490 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |