y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10010307 |
Family | GH9 |
Protein Properties | Length: 502 Molecular Weight: 55744.1 Isoelectric Point: 9.7416 |
Chromosome | Chromosome/Scaffold: 732 Start: 123475 End: 125589 |
Description | glycosyl hydrolase 9B13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 382 | 492 | 1e-36 |
HDYKSHADWQVDYLLGDNPLRMSYMVGYGPRYPARIHHRGSSLPSTSSHPAKIQCTAGFSVMKSQSPNPNVLVGAVVGGPDGRDRFPDQRSDYEQSEPCT YINAPLVGSLA | |||
GH9 | 109 | 389 | 0 |
NYRDALTKSILFFEGQRSGKLPSSQRLSWRRDSGLSDGSAMNVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELSNAREAIRWATDYLLK ATAHPDTIYVQVGDARKDHACWERPEDMDTPRSVFKVDKNSPGSDVAGETAAALAAASLVFRRCDPSYSRLLLKRAITVFQFADKYRGPYSKGLKRFVCP FYCSYSGYQDELLWGAAWLHRATRNPTYLSYIQINGQILGAAEFDNTFGWDNKHVGARILLSKAFLVQGVQTLHDYKSHAD |
Full Sequence |
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Protein Sequence Length: 502 Download |
MKQKQAREHG KGIWVLIITC TNPKGPPKGQ TLHSTSSTTT SSSFFLYKYS ATDISSHRRL 60 LQQFAVPFGK KKMATSSSFT LLLLLLTLLP NSHGAHYNHR SHPRTASHNY RDALTKSILF 120 FEGQRSGKLP SSQRLSWRRD SGLSDGSAMN VDLVGGYYDA GDNVKFGFPM AFTTTMLSWS 180 VIEFGGLMKG ELSNAREAIR WATDYLLKAT AHPDTIYVQV GDARKDHACW ERPEDMDTPR 240 SVFKVDKNSP GSDVAGETAA ALAAASLVFR RCDPSYSRLL LKRAITVFQF ADKYRGPYSK 300 GLKRFVCPFY CSYSGYQDEL LWGAAWLHRA TRNPTYLSYI QINGQILGAA EFDNTFGWDN 360 KHVGARILLS KAFLVQGVQT LHDYKSHADW QVDYLLGDNP LRMSYMVGYG PRYPARIHHR 420 GSSLPSTSSH PAKIQCTAGF SVMKSQSPNP NVLVGAVVGG PDGRDRFPDQ RSDYEQSEPC 480 TYINAPLVGS LAYLAHSFGQ L* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 3.0e-49 | 388 | 497 | 111 | + endoglucanase | ||
PLN02266 | PLN02266 | 5.0e-70 | 378 | 501 | 124 | + endoglucanase | ||
PLN02308 | PLN02308 | 5.0e-148 | 105 | 389 | 285 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 5.0e-173 | 109 | 492 | 451 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 0 | 90 | 389 | 300 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002271736.1 | 0 | 97 | 401 | 35 | 339 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301487.1 | 0 | 78 | 401 | 7 | 339 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002301487.1 | 0 | 378 | 501 | 388 | 511 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002320998.1 | 0 | 73 | 401 | 1 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320998.1 | 0 | 388 | 501 | 397 | 510 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 107 | 494 | 2 | 428 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1ksc_A | 0 | 107 | 494 | 2 | 428 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1ks8_A | 0 | 107 | 494 | 2 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 109 | 499 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 109 | 499 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY264797 | 269 | 108 | 376 | 0 |
CO123359 | 270 | 90 | 359 | 0 |
CO125126 | 253 | 137 | 389 | 0 |
JK791052 | 251 | 137 | 387 | 0 |
FQ418438 | 263 | 97 | 359 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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