Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10010478 |
Family | CBM43 |
Protein Properties | Length: 766 Molecular Weight: 83526 Isoelectric Point: 8.007 |
Chromosome | Chromosome/Scaffold: 910 Start: 310126 End: 314499 |
Description | mRNA capping enzyme family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 681 | 759 | 1.8e-32 |
WCVSKPTVSDAILQRGLDYACGMGADCKQIQPGGPCFQPNTVSAHSSFAFNSYWQKGKAAGGTCDFGGTAMIVTIDPSK |
Full Sequence |
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Protein Sequence Length: 766 Download |
MKRGYTDSPS NSAAPPKSRL KYSTEGGLAV SCSNSTTPLF TKRDAQFSED VVQKVADHYS 60 ARTNQTLEER EASPIIHLKK LNNWIKSVLI QLYARRGDAV LDLACGKGGD LIKWDKAKAG 120 YYVGVDIAEG SIEDCRTRYN GDANHHQNRK KFSFPARLIC GDCFEIRLDK VLADDAPFDL 180 CSCQFAMHYS FSTETRARRA LANVSALLRP GGTMIGTMPD ANVIIKKLRE SDGLAFGNSV 240 YSIRFDDDYS EKASYSYSFK HLVASETFLK STSYKLHLTF SFIQKFNSSS PFGIKYQFHL 300 EDAVDCPEWI VPFDVFKSLA EQYDLELVFV KNEHEFVHEY LKKPEYVELM RRLGALGDSQ 360 DRSALTPDEW EVSYLYLAFV LRKRGQPDRS QVNRRREKGK MQISKDDIIK KMKARSSIVS 420 LKELSFIIVL ILLQIVIFSA TADARSLRVF EHGSYERPDE MLSSELQETI FEPDVAETPM 480 GLFSQVPVPQ QLPPLSSPAP ICAYPPSTLP SPATNPCSPP PPSALPSPAT NPCSPPQVPS 540 TIPSPTSYPS SPPPPSSSTI PSPTSYPSSP PPPSSSTIPS PTSYPSSPPP PPSPSTLPSP 600 TSKPPPYLPA QGPPPPFLPA QGPSPPPSLP TEGPPPTIPS PPLLQPSPPM SIPIPPSHNP 660 TVPVMPYTPP PAGKKPGTGS WCVSKPTVSD AILQRGLDYA CGMGADCKQI QPGGPCFQPN 720 TVSAHSSFAF NSYWQKGKAA GGTCDFGGTA MIVTIDPSKY KFFGI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd02440 | AdoMet_MTases | 1.0e-10 | 100 | 215 | 116 | + S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). | ||
pfam08241 | Methyltransf_11 | 1.0e-10 | 101 | 215 | 115 | + Methyltransferase domain. Members of this family are SAM dependent methyltransferases. | ||
pfam07983 | X8 | 2.0e-23 | 680 | 751 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-38 | 680 | 758 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam03291 | Pox_MCEL | 7.0e-120 | 48 | 384 | 359 | + mRNA capping enzyme. This family of enzymes are related to pfam03919. |
Gene Ontology | |
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GO Term | Description |
GO:0006370 | 7-methylguanosine mRNA capping |
GO:0008152 | metabolic process |
GO:0008168 | methyltransferase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_188701.2 | 0 | 1 | 409 | 1 | 366 | mRNA capping enzyme family protein [Arabidopsis thaliana] |
RefSeq | NP_974346.1 | 0 | 1 | 409 | 1 | 365 | mRNA capping enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002283163.1 | 0 | 1 | 409 | 1 | 366 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317555.1 | 0 | 1 | 409 | 1 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528402.1 | 0 | 1 | 409 | 1 | 362 | mRNA (guanine-7-)methyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3epp_B | 0 | 73 | 384 | 4 | 312 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3epp_A | 0 | 73 | 384 | 4 | 312 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3bgv_D | 0 | 73 | 384 | 4 | 312 | A Chain A, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase In Complex With Sah |
PDB | 3bgv_C | 0 | 73 | 384 | 4 | 312 | A Chain A, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase In Complex With Sah |
PDB | 3bgv_B | 0 | 73 | 384 | 4 | 312 | A Chain A, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase In Complex With Sah |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX278143 | 362 | 1 | 357 | 0 |
DT766981 | 312 | 53 | 363 | 0 |
DY829660 | 315 | 95 | 408 | 0 |
GO847340 | 344 | 65 | 408 | 0 |
FQ478893 | 325 | 1 | 320 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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