| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10011035 |
| Family | GH14 |
| Protein Properties | Length: 539 Molecular Weight: 60195.4 Isoelectric Point: 7.6104 |
| Chromosome | Chromosome/Scaffold: 1035 Start: 223595 End: 226096 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 81 | 495 | 0 |
| FVMLPLDTVTHGGHLNKPKLMNASLMALKRAGVEGVMVDAWWGLVEKEGPLKYNWEGYAELVQMVKRHGLKIQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISRNPDLVYTDRSGRRNPEYISLGCDALAVLRGRTPIQVYTDYMRSFRNRFRDYLGNVIVEVQVGMGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMI ASLKASANELGRPDWGIGGPHDSGQYNQFPEDTGFFKWDGTWNTDYGQFFLEWHSEKLIRHGNDILAAGKGIFKGTGAKLSGKVAGIHWHYKTRSHAAEL TAGYYNTRYRDGYLPISRMFGRHGVVLNFTCMEMRDGEQPEYASCSPQGLVWQVQMATKAAGIELAGENALERYDADAYRQVMATSGAELGNGLTAFTYL RMNKRLFEEGNWRHL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 539 Download |
| MALTLRSPTS FTNLKDTTRS LLRTDNVSSN GSICFPQIKP GRGQVLGRRV QAHNGLILPS 60 EEKLHLLSIP HDNNSAKVPV FVMLPLDTVT HGGHLNKPKL MNASLMALKR AGVEGVMVDA 120 WWGLVEKEGP LKYNWEGYAE LVQMVKRHGL KIQVVMSFHQ CGGNVGDSCS IPLPPWVLEE 180 ISRNPDLVYT DRSGRRNPEY ISLGCDALAV LRGRTPIQVY TDYMRSFRNR FRDYLGNVIV 240 EVQVGMGPCG ELRYPAYPES NGTWKFPGIG EFQCYDKYMI ASLKASANEL GRPDWGIGGP 300 HDSGQYNQFP EDTGFFKWDG TWNTDYGQFF LEWHSEKLIR HGNDILAAGK GIFKGTGAKL 360 SGKVAGIHWH YKTRSHAAEL TAGYYNTRYR DGYLPISRMF GRHGVVLNFT CMEMRDGEQP 420 EYASCSPQGL VWQVQMATKA AGIELAGENA LERYDADAYR QVMATSGAEL GNGLTAFTYL 480 RMNKRLFEEG NWRHLAEFVK SMSEGGENGL EAATQRSDLF IGFVTDKDFK EMGDILLV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02161 | PLN02161 | 7.0e-143 | 77 | 503 | 438 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 8.0e-166 | 81 | 498 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02803 | PLN02803 | 0 | 1 | 538 | 551 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 78 | 505 | 434 | + beta-amylase; Provisional | ||
| PLN02801 | PLN02801 | 0 | 78 | 502 | 433 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62440.1 | 0 | 1 | 527 | 1 | 531 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282871.1 | 0 | 1 | 527 | 1 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 538 | 1 | 547 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 538 | 1 | 548 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517513.1 | 0 | 1 | 538 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 1q6c_A | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1ukp_D | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 535 | 1 | 524 | 0 |
| HO794833 | 419 | 116 | 532 | 0 |
| HO781538 | 365 | 62 | 425 | 0 |
| HO825836 | 382 | 152 | 531 | 0 |
| HO624546 | 403 | 108 | 505 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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