Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10011132 |
Family | CE8 |
Protein Properties | Length: 388 Molecular Weight: 42312.5 Isoelectric Point: 8.8985 |
Chromosome | Chromosome/Scaffold: 1558 Start: 225416 End: 227777 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 88 | 381 | 0 |
TVDKNPAAGDFTSIQKAIDSLPFINIVRVVIKVHAGVYTEKVSIPALKSFITIQGAGAETTIVQWGDTAETPSPSNHKPMGTYGSATFAVNSPFFVAKYI TFKNTSPVPPPGAAGKQAVALRISADTAAFVGCRFLGGQDTLYDHFGRHYYKGCYIEGSVDFIFGNGLSYFEGCHVHAIAEYTGALTAQGRSSLLQDTGF SFVKCRVTGSGGALFLGRAWGPFSRVVFAYTYMDDFILPKGWYNWGDPIRELTVFYGQYKCTGAGARFGGRVAWSRELSDDEAKPFLSLSFIDG |
Full Sequence |
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Protein Sequence Length: 388 Download |
MPQLLTSSIS LLIIILLLLL LLTSPQTTFC HAKGFNPRDS SLGQNNLTAA RAQLSEQQFM 60 KWVEFVGTLK HSIFKVAKNK LFPSFTLTVD KNPAAGDFTS IQKAIDSLPF INIVRVVIKV 120 HAGVYTEKVS IPALKSFITI QGAGAETTIV QWGDTAETPS PSNHKPMGTY GSATFAVNSP 180 FFVAKYITFK NTSPVPPPGA AGKQAVALRI SADTAAFVGC RFLGGQDTLY DHFGRHYYKG 240 CYIEGSVDFI FGNGLSYFEG CHVHAIAEYT GALTAQGRSS LLQDTGFSFV KCRVTGSGGA 300 LFLGRAWGPF SRVVFAYTYM DDFILPKGWY NWGDPIRELT VFYGQYKCTG AGARFGGRVA 360 WSRELSDDEA KPFLSLSFID GSEWIQL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 6.0e-103 | 48 | 385 | 339 | + probable pectinesterase | ||
PLN02304 | PLN02304 | 5.0e-108 | 86 | 386 | 309 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-111 | 86 | 385 | 301 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 5.0e-113 | 83 | 386 | 304 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 0 | 44 | 387 | 344 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 14 | 387 | 10 | 379 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001044216.1 | 0 | 11 | 387 | 6 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_197474.1 | 0 | 28 | 387 | 26 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 14 | 387 | 11 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 5 | 387 | 1 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 83 | 386 | 7 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-39 | 96 | 386 | 13 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-25 | 85 | 380 | 31 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 4e-16 | 84 | 373 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 4e-16 | 84 | 373 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |