| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10011403 |
| Family | GH5 |
| Protein Properties | Length: 581 Molecular Weight: 64448.9 Isoelectric Point: 6.7191 |
| Chromosome | Chromosome/Scaffold: 744 Start: 375801 End: 378580 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 45 | 352 | 9.09443e-43 |
| AGRRVKLACVNLVSHLEPLVAEGLSKLPIEAIAGKITSLGFNCVRLTWPIYLVTNDSLGSLTVRESFRGLGLFDSLAGIQANNPAIVDLSLVMAFQKVVS SLGENNVMVILDNHITTPGWCCSNNDGNGFFNDQLFDPELWITGLTKMATMFRASTTVVGMSLRNELRGPRQNSNDWYKYMQRGAEAVHSANPNVLVVLS GLSFDTDLSFLSRKMVSLSFGKKLVFEMHWYGFSDGQAWANGNVNDVCGRVGREKVRNGLFLVEKGYPLFVSEFGLDLRGTNVNDNRYADCFMAYAAEHD LDWAYWTI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 581 Download |
| MANHKHHINL LSTIFLLFLF LLLPQKSTPY PLSTSSRWIV DDAAAGRRVK LACVNLVSHL 60 EPLVAEGLSK LPIEAIAGKI TSLGFNCVRL TWPIYLVTND SLGSLTVRES FRGLGLFDSL 120 AGIQANNPAI VDLSLVMAFQ KVVSSLGENN VMVILDNHIT TPGWCCSNND GNGFFNDQLF 180 DPELWITGLT KMATMFRAST TVVGMSLRNE LRGPRQNSND WYKYMQRGAE AVHSANPNVL 240 VVLSGLSFDT DLSFLSRKMV SLSFGKKLVF EMHWYGFSDG QAWANGNVND VCGRVGREKV 300 RNGLFLVEKG YPLFVSEFGL DLRGTNVNDN RYADCFMAYA AEHDLDWAYW TIVGSYYLRQ 360 GIVGLSEVYG LLDVDWMELR NQSFIEKIKG IQAPFQGPGL GERRQHQVIF HPSTGKCILR 420 GKTYLDPLTL GPCTESDAWS YSSKGSLSQV GTYFCLKANE LGQPVQLDMD CSNWAMISDS 480 KMHISTKLDD GTSSVCLDVD TDNDNIIIAN PCKCLSKDKG CDPVSQWFKL VASTRAPSGG 540 DDRLVTRARE MLFKVLDMVL YYVGRMFGTL ALKIAREIEG * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00458 | RICIN | 0.003 | 409 | 512 | 116 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
| COG2730 | BglC | 0.0008 | 48 | 385 | 373 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| cd00161 | RICIN | 0.0001 | 407 | 512 | 121 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| pfam00150 | Cellulase | 2.0e-20 | 70 | 352 | 289 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_172772.2 | 0 | 23 | 535 | 23 | 537 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002285424.1 | 0 | 16 | 534 | 13 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312657.1 | 0 | 22 | 538 | 1 | 516 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315653.1 | 0 | 31 | 538 | 4 | 509 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515055.1 | 0 | 24 | 558 | 25 | 565 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.000000000003 | 34 | 351 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.000000000003 | 34 | 351 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.00000000002 | 34 | 351 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00000000002 | 34 | 351 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 4dm1_C | 0.0003 | 49 | 384 | 28 | 369 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |
