Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10011465 |
Family | CBM22 |
Protein Properties | Length: 1132 Molecular Weight: 124137 Isoelectric Point: 6.4801 |
Chromosome | Chromosome/Scaffold: 1578 Start: 225712 End: 230965 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 507 | 643 | 3.8e-31 |
NLIVNHNFEDGLNNWSARGCKILVHNSKADRKIVQESSKFIVVATGRTASWHGIHQEITGRVQRKLVYEVTAIVRIYGNNVTCADVQATLWVRNPDNREE YIGIAKSQAKDSDWVKLQGKFLLNGSPKKIVVYLEGP | |||
CBM22 | 168 | 305 | 2.2e-31 |
NIIVNHDFSEGLQSWHPNSCDGFVVSSNSDRLGLSAALVGGYAVVSNRKHCWQGIEQDITARVSPGLTYTVSAVVGVSGHIQGSAEVIATLKLEQQGSGT QYLRVGKATVLKGQLEMLEGNFCLPTIPDRVVLYFEGP | |||
CBM22 | 332 | 469 | 1.1e-31 |
NIILNNNFSQGLESWNTNHCDGYVVKIDLSHLGSLANEAGSYAVVSNRNESWQGLEQDITSKVSPGLTYFVSAFVGVSGQIKGSAEEVNGTLKLEHQGSA TNYLPVGKTSVCNGKWKKLEGSFSLSTMPDRVVFYIEG | |||
CBM22 | 677 | 819 | 9.6e-40 |
NILHNSDLSDGTNGWFPLGNCSLTVATGSPHVIAPMARESLGVHEPLSGRCIAVTNRTQTWMGPAQTITDKVKLFLTYQITAWVKICPGGANGPQNVNVA LGVDNEWVNGGQIEINDDQWHEIGSSFRIEKQASKIMVYIQGP |
Full Sequence |
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Protein Sequence Length: 1132 Download |
MFYGSTVWDP WLIVAQIVCL QCFYYLTLGF SLSLLVGIRV SRLSLVYFFD FVAVISSSAT 60 GVSSPPSSSA HSPVYGGWPS SLTWWVVNIT GLAVMALLSE YLCVRRERRE IPLTRNRSNW 120 YLYLKQETKG VDLFGSAFSC QTMDENMGNS NSSTHFLNDP VINNSMKNII VNHDFSEGLQ 180 SWHPNSCDGF VVSSNSDRLG LSAALVGGYA VVSNRKHCWQ GIEQDITARV SPGLTYTVSA 240 VVGVSGHIQG SAEVIATLKL EQQGSGTQYL RVGKATVLKG QLEMLEGNFC LPTIPDRVVL 300 YFEGPSAGVD ILIASVKVAD ETNKYLSNRV SNIILNNNFS QGLESWNTNH CDGYVVKIDL 360 SHLGSLANEA GSYAVVSNRN ESWQGLEQDI TSKVSPGLTY FVSAFVGVSG QIKGSAEEVN 420 GTLKLEHQGS ATNYLPVGKT SVCNGKWKKL EGSFSLSTMP DRVVFYIEGA SPGANLLIKS 480 VFIGNADSSK SMGVRISHGS SANENENLIV NHNFEDGLNN WSARGCKILV HNSKADRKIV 540 QESSKFIVVA TGRTASWHGI HQEITGRVQR KLVYEVTAIV RIYGNNVTCA DVQATLWVRN 600 PDNREEYIGI AKSQAKDSDW VKLQGKFLLN GSPKKIVVYL EGPPPGIDIL VNSFTLKRAK 660 KVLSSPLQIE HPAFGVNILH NSDLSDGTNG WFPLGNCSLT VATGSPHVIA PMARESLGVH 720 EPLSGRCIAV TNRTQTWMGP AQTITDKVKL FLTYQITAWV KICPGGANGP QNVNVALGVD 780 NEWVNGGQIE INDDQWHEIG SSFRIEKQAS KIMVYIQGPA VGTDFMVAGL QIFAVDRAAR 840 FNHLKRLTDK IRKRDVTLKL TGANSSCLRG TLVKVRQTQN SFPLGTCISR SNIDNEDFVN 900 FFVKNFNWAV FGNELKWSWT ESQQGSLNYK DADDIPAMDQ ILEQRKLYES SATPVKYLEQ 960 VLNLQEQGAP VGGIGIQGHI DNPVGPVVCS ALDKLGILGL PIWFTELDVS SVNEHVRAED 1020 LEVMLREAYA HPSVEGIVLW GFWELFMCRE NSHLVDAEGE LNEAGRRFLA LKEEWMSHAD 1080 GCIGEHGEFG FRGFHGTYTV EIVGLETVVT KTFAVEKGDT PLILSIDLSN A* 1140 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00331 | Glyco_hydro_10 | 1.0e-10 | 880 | 935 | 57 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 2.0e-20 | 947 | 1072 | 137 | + Glycosyl hydrolase family 10. | ||
pfam09801 | SYS1 | 1.0e-21 | 3 | 113 | 144 | + Integral membrane protein S linking to the trans Golgi network. Members of this family are integral membrane proteins involved in protein trafficking between the late Golgi and endosome. They may also serve as a receptor for ADP-ribosylation factor-related protein 1 (ARFRP1). Sys1p is a small integral membrane protein with four predicted transmembrane domains that localises to the Trans Golgi network TGN in yeast and human cells. | ||
smart00633 | Glyco_10 | 9.0e-29 | 947 | 1068 | 132 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002301133.1 | 0 | 110 | 651 | 120 | 655 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 168 | 935 | 2 | 763 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 506 | 832 | 1 | 314 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 949 | 1128 | 870 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510025.1 | 0 | 327 | 935 | 14 | 614 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xyz_B | 0.0001 | 958 | 1046 | 212 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1xyz_A | 0.0001 | 958 | 1046 | 212 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 3msg_B | 0.0008 | 939 | 1028 | 155 | 268 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 3msg_A | 0.0008 | 939 | 1028 | 155 | 268 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 3msd_B | 0.0008 | 939 | 1028 | 155 | 268 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |