Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10011482 |
Family | GH17 |
Protein Properties | Length: 427 Molecular Weight: 47088 Isoelectric Point: 9.0498 |
Chromosome | Chromosome/Scaffold: 1578 Start: 349782 End: 351209 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 71 | 389 | 0 |
GVNYGRIADNLPSPHSVVTLLKAAKIKNVRIYDTDSQVLSAFKGSGLELIVGLGNEFLKDISLGEDRAMNWIKENVQPYLPGTKIVGIAVGNEILGGTDI ELWEALLPSVRNVYSALQRLGLHDKIEISSPNSEAVFTNSFPPSACIFRPDVEVFMVPLLQFFSRIGSPFYINAYPFLAYKSDPEHIDLKYALFQPNSGI WDSKTNLHYDNMFDAQVDAAYAALEKAGFGKMEVIVSETGWASNGDQNEAGADLQNAKTYNKNLKKRLAKKKGTPYRPKSKVRAYVFALFNENLKPGPTS ERNFGLFKPDGSIAYDIGF |
Full Sequence |
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Protein Sequence Length: 427 Download |
MESYFLGNSS SRSSLFMMAS SSSFINSLSF RLFFLLCLLY STGRSITLLR DVILLFSSAD 60 YSADAFTGTY GVNYGRIADN LPSPHSVVTL LKAAKIKNVR IYDTDSQVLS AFKGSGLELI 120 VGLGNEFLKD ISLGEDRAMN WIKENVQPYL PGTKIVGIAV GNEILGGTDI ELWEALLPSV 180 RNVYSALQRL GLHDKIEISS PNSEAVFTNS FPPSACIFRP DVEVFMVPLL QFFSRIGSPF 240 YINAYPFLAY KSDPEHIDLK YALFQPNSGI WDSKTNLHYD NMFDAQVDAA YAALEKAGFG 300 KMEVIVSETG WASNGDQNEA GADLQNAKTY NKNLKKRLAK KKGTPYRPKS KVRAYVFALF 360 NENLKPGPTS ERNFGLFKPD GSIAYDIGFT GLKDSSSSRV RARGMVVVRK CLVSLLILVG 420 LLSSIW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.003 | 57 | 380 | 336 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-100 | 71 | 389 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 60 | 411 | 19 | 373 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 60 | 411 | 30 | 389 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 59 | 392 | 19 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 59 | 396 | 6 | 343 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 65 | 398 | 3 | 336 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 71 | 389 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 71 | 389 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 71 | 390 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 71 | 390 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 71 | 390 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK988667 | 305 | 45 | 348 | 0 |
EL455956 | 297 | 65 | 361 | 0 |
CO114700 | 274 | 53 | 326 | 0 |
ES912714 | 266 | 65 | 330 | 0 |
EL481804 | 272 | 49 | 319 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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