| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10011500 |
| Family | GT43 |
| Protein Properties | Length: 310 Molecular Weight: 34774.6 Isoelectric Point: 6.2677 |
| Chromosome | Chromosome/Scaffold: 260 Start: 1383 End: 3309 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 1 | 232 | 0 |
| MLVPYDVVWIVVEAGGMTNETANLVSKSGLKNTIHVGVDERMPDTWEGRRKLESEMRIRALRVVREKKLDGIVMFADDSNMHSMELFDEIQTINWFGALS LGILIHSNGVEESSSSMAGIPVQGPACNASDKLAGWHTVDSLPYDGNNSTAVYIDDAAAVLPRKHEWAGFVLNSRLLWKEGDKPRWVGDLDSVVDDKELM ELSPLSLVKDSSMVEPLGSCGRRVLVWWVRVE | |||
| Full Sequence |
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| Protein Sequence Length: 310 Download |
| MLVPYDVVWI VVEAGGMTNE TANLVSKSGL KNTIHVGVDE RMPDTWEGRR KLESEMRIRA 60 LRVVREKKLD GIVMFADDSN MHSMELFDEI QTINWFGALS LGILIHSNGV EESSSSMAGI 120 PVQGPACNAS DKLAGWHTVD SLPYDGNNST AVYIDDAAAV LPRKHEWAGF VLNSRLLWKE 180 GDKPRWVGDL DSVVDDKELM ELSPLSLVKD SSMVEPLGSC GRRVLVWWVR VEARFDSKFP 240 AGWMIDPRLD ITVPSKQTPW PQVAPELNSE EPRPIQLVKR RSSSSRSMVR RTRKHVETQQ 300 QQQAQNKTV* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 2.0e-13 | 2 | 198 | 200 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 4.0e-46 | 1 | 233 | 242 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 2.0e-48 | 1 | 233 | 237 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI93186.1 | 0 | 1 | 271 | 184 | 454 | glycosyltransferase [Gossypium raimondii] |
| EMBL | CAI93188.1 | 0 | 1 | 307 | 185 | 506 | glycosyltransferase [Solanum lycopersicum] |
| RefSeq | NP_201524.1 | 0 | 1 | 302 | 178 | 481 | glycosyl transferase family 43 protein [Arabidopsis thaliana] |
| RefSeq | XP_002306485.1 | 0 | 1 | 299 | 182 | 494 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002310709.1 | 0 | 1 | 271 | 183 | 462 | glycosyl transferase, CAZy family GT43 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.0000002 | 9 | 232 | 36 | 234 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
| PDB | 1v84_A | 0.0000002 | 9 | 232 | 36 | 234 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
| PDB | 1v83_B | 0.0000002 | 9 | 232 | 36 | 234 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
| PDB | 1v83_A | 0.0000002 | 9 | 232 | 36 | 234 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
| PDB | 1v82_B | 0.0000002 | 9 | 232 | 36 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO114164 | 282 | 1 | 271 | 0 |
| DR928119 | 272 | 9 | 270 | 0 |
| HO800917 | 277 | 1 | 269 | 0 |
| ES835057 | 251 | 27 | 271 | 0 |
| FY469831 | 266 | 17 | 273 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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