Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10011765 |
Family | GT14 |
Protein Properties | Length: 431 Molecular Weight: 47757.4 Isoelectric Point: 9.6483 |
Chromosome | Chromosome/Scaffold: 568 Start: 420889 End: 422935 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 84 | 339 | 0 |
IAYLISGSKGDSNRILRLLFSIYHPKNHYLLHLDLSPPVSERDALALAVDSSPVFQAAQNVDVIGKPDFAYHRGSSPVSTTLHGASLLLKLSNNWDWFVS LGAADYPLVTQDDLLHIFSYLPKDLNFVSHSSYIGWKESRRLKPIIVDPGLYLAEKSYMFHATQRRPLPTYFRLFTGSSFSVLSRNFIEHCIVGTDNLPR ILLMYFSNTMSSITSYFHTVLCNSPQFNRTIINQDLQYKVLDQSFRQEPRRLNSSD |
Full Sequence |
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Protein Sequence Length: 431 Download |
MPPPSPRPTT PTTPGGKDNS TRTTTITVIL ATSFFSLLFI FSLSSSSSSS ASSQSFRIRP 60 DPRLFPTRQP TFSTFPSDPA PPSIAYLISG SKGDSNRILR LLFSIYHPKN HYLLHLDLSP 120 PVSERDALAL AVDSSPVFQA AQNVDVIGKP DFAYHRGSSP VSTTLHGASL LLKLSNNWDW 180 FVSLGAADYP LVTQDDLLHI FSYLPKDLNF VSHSSYIGWK ESRRLKPIIV DPGLYLAEKS 240 YMFHATQRRP LPTYFRLFTG SSFSVLSRNF IEHCIVGTDN LPRILLMYFS NTMSSITSYF 300 HTVLCNSPQF NRTIINQDLQ YKVLDQSFRQ EPRRLNSSDF TTMIRSGAAF ASQFGANDPV 360 LGRIDSDILK RSPGEILPGG WCLGDPANTT CSVWGDANVL RPGKGAARLE KLVVKMLSNG 420 KFRSQQCIVE * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-60 | 84 | 321 | 238 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 4.0e-138 | 66 | 427 | 362 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80510.1 | 0 | 61 | 430 | 57 | 459 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_189046.1 | 0 | 24 | 430 | 10 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002282998.1 | 0 | 61 | 430 | 57 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299292.1 | 0 | 28 | 430 | 26 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518166.1 | 0 | 10 | 430 | 20 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00001 | 100 | 285 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00001 | 100 | 285 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00001 | 100 | 285 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00001 | 100 | 285 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00002 | 100 | 285 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY288592 | 308 | 57 | 364 | 0 |
DW503810 | 266 | 166 | 431 | 0 |
DT548015 | 326 | 94 | 417 | 0 |
DT507687 | 217 | 59 | 275 | 0 |
DV986170 | 294 | 140 | 431 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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