| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10011882 |
| Family | GT1 |
| Protein Properties | Length: 619 Molecular Weight: 67226.7 Isoelectric Point: 6.3577 |
| Chromosome | Chromosome/Scaffold: 754 Start: 211928 End: 217048 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 178 | 584 | 0 |
| IVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKILAGYMVKNKGFLPSGPSEIPVQRTQLKDIIWSLLAACKEPDMDSGIP FKADAIIANPPAYGHTHVAEALKVPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGSESEVPH AYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNFEPPEELVKWLKAGPTPIYIGFGSLPVQEPEKMTQIIVEALEQTGQRGIINKGWGGLGNLAEPKDCIY LLDNIPHDWLFLQCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVEEFTLSKLVDAIEFMLDPQVKEKAVELAKAMENEDG VAGAVTA | |||
| Full Sequence |
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| Protein Sequence Length: 619 Download |
| MTESAEHRRN SSSSSSSSAS VDVQVPGSKS EIGGATSSGN GLEVKISGDA AAAAGGNSVN 60 NGGDAAESTS RTKGLESTSS QLKLERSKTE RQRPHNILAE EAAQIFDDKI PLQQKLQLLK 120 RIATVKDNGT VEFEVPGDVE HQSLDTRGED ACSTAAGDEP LDAAELQYIP PLQVVMLIVG 180 TRGDVQPFIA IGKRLQDYGH RVRLATHSNF KEFVLTAGLE FYPLGGDPKI LAGYMVKNKG 240 FLPSGPSEIP VQRTQLKDII WSLLAACKEP DMDSGIPFKA DAIIANPPAY GHTHVAEALK 300 VPIHIFFTMP WTPTSEFPHP LSRVKQPAGY RLSYQIVDSL IWLGIRDMIN DVRKKKLKLR 360 PVTYLSGSQG SESEVPHAYI WSPHLVPKPK DWGPKIDVVG FCFLDLASNF EPPEELVKWL 420 KAGPTPIYIG FGSLPVQEPE KMTQIIVEAL EQTGQRGIIN KGWGGLGNLA EPKDCIYLLD 480 NIPHDWLFLQ CKAVVHHGGA GTTAAGLKAA CPTTIVPFFG DQPFWGERVH ARGVGPPPIP 540 VEEFTLSKLV DAIEFMLDPQ VKEKAVELAK AMENEDGVAG AVTAFFKQLP KKKKKDEPER 600 VPEPPSSMFS FSRCFGCS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03033 | Glyco_transf_28 | 6.0e-34 | 174 | 318 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| COG1819 | COG1819 | 4.0e-34 | 175 | 579 | 412 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 1.0e-120 | 174 | 582 | 409 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 13 | 618 | 4 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 5 | 618 | 2 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 1 | 618 | 45 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321244.1 | 0 | 76 | 617 | 11 | 552 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521125.1 | 0 | 29 | 618 | 26 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 2e-31 | 172 | 595 | 1 | 387 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3h4i_A | 2e-31 | 172 | 595 | 1 | 387 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 4e-23 | 415 | 593 | 229 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 1e-22 | 172 | 577 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 181 | 515 | 0 |
| DY295142 | 413 | 72 | 483 | 0 |
| GO883166 | 334 | 134 | 467 | 0 |
| CX664063 | 295 | 271 | 565 | 0 |
| GT046352 | 26 | 508 | 533 | 0.0007 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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