Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10011883 |
Family | GT1 |
Protein Properties | Length: 548 Molecular Weight: 60534.7 Isoelectric Point: 6.7807 |
Chromosome | Chromosome/Scaffold: 754 Start: 220566 End: 223843 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 131 | 514 | 0 |
LIVGTRGDVQPFVAIGLRLKGYGHRVRVATHSIFKEFVLTAGLEFYPLGGDSKVLASYMVTNKGLFPSNPSEISVHRNQMKEIIWSLLPACTEPDIDSGI PFTAEAIIANPPTMGHIDVAEALQIPIHIFFTLPWTSTHEFPHPLTRVKQAVLYWMSYQIVDSLIWLGIGDIINDVRKRELKLRPVTFRTGLRSSNSDIP YGYLWSPDLVPKPTDWGPNVEVVGYCFLDLASNFEVPEELVKWLEAGPKPIYIGFGSCPIQEPEKITQIIVEALEQTGQRGIIDKGWGGLGNCKVHHGGA GTTAAGLKAACPTTIVPFVADQPFWGDRVHARGVGPAPIPVEEFSLPKLVDAIKFMLDPQVKERAVELAKAMENEDGVAGAVTA |
Full Sequence |
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Protein Sequence Length: 548 Download |
MLSSLNGLEL RNSESRYAGN PCGWPGGCGN EGTERRRRSR ILLGCGDFRR RFIGERGNDG 60 PHVERHFWSL ILLGFITYGL LEIKVNLSVL CYYDYSFSEV FKISFCAAAG DDEPLGAVEF 120 QNLPPLQIVM LIVGTRGDVQ PFVAIGLRLK GYGHRVRVAT HSIFKEFVLT AGLEFYPLGG 180 DSKVLASYMV TNKGLFPSNP SEISVHRNQM KEIIWSLLPA CTEPDIDSGI PFTAEAIIAN 240 PPTMGHIDVA EALQIPIHIF FTLPWTSTHE FPHPLTRVKQ AVLYWMSYQI VDSLIWLGIG 300 DIINDVRKRE LKLRPVTFRT GLRSSNSDIP YGYLWSPDLV PKPTDWGPNV EVVGYCFLDL 360 ASNFEVPEEL VKWLEAGPKP IYIGFGSCPI QEPEKITQII VEALEQTGQR GIIDKGWGGL 420 GNCKVHHGGA GTTAAGLKAA CPTTIVPFVA DQPFWGDRVH ARGVGPAPIP VEEFSLPKLV 480 DAIKFMLDPQ VKERAVELAK AMENEDGVAG AVTAFFKQLV KNQNKAKPDR VSEPSSLFRF 540 GRCFGFS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1819 | COG1819 | 4.0e-24 | 128 | 509 | 415 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
pfam03033 | Glyco_transf_28 | 5.0e-27 | 128 | 272 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
cd03784 | GT1_Gtf_like | 2.0e-99 | 128 | 512 | 408 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC22617.1 | 0 | 111 | 547 | 145 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
EMBL | CBI37267.1 | 0 | 109 | 547 | 155 | 615 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265023.1 | 0 | 109 | 547 | 202 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321244.1 | 0 | 106 | 545 | 87 | 551 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521125.1 | 0 | 111 | 547 | 166 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 6e-23 | 126 | 525 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 3h4i_A | 6e-23 | 126 | 525 | 1 | 387 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1rrv_B | 2e-19 | 126 | 507 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 2e-19 | 126 | 507 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1iir_A | 3e-19 | 126 | 523 | 1 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO883166 | 310 | 112 | 421 | 0 |
GT046352 | 288 | 135 | 422 | 0 |
CX664063 | 295 | 225 | 495 | 0 |
HO626576 | 424 | 124 | 519 | 0 |
GT046352 | 29 | 441 | 469 | 0.015 |
Sequence Alignments (This image is cropped. Click for full image.) |
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