| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10012804 |
| Family | GH14 |
| Protein Properties | Length: 534 Molecular Weight: 59144.4 Isoelectric Point: 5.8683 |
| Chromosome | Chromosome/Scaffold: 604 Start: 369176 End: 371314 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 86 | 494 | 0 |
| FVGLPLDVVSECNSVNHSRAITAGLKALKLLGIEGVELPLWWGLVEKEGKGRYDWSGYLAVAEMVQNADLKLHVSLNFHANNHPKVSLPQWISKIGESNP SIFYRDRSGDVYKDCLSLGVDDLPVLDGETPLQVYKDFCDSFKSSFAHFLGSTVTSVTMGLGPDGELRYPSHHKLSNNGEFPAGVGEFQCYDKNMMNLLK QHAEAYGFPLWGLGGPHDAPSYNQSPDSNGFFKELSGSWESPYGDFFLSWYSKQLLSHGDRILSMAFDVFSNSGVAIHGRVPLLHSWYRTRSRALENTAG FYNTDSKDGYEAVAEIFARNSCRMMLPGMDLSDDEQPQESMSSPELLLAQIQAACKRHGVGVSGMNSKPVSNGFDQIRKNVMGEKDVVDLFSYQRMGAEF FSPENFPSF | |||
| Full Sequence |
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| Protein Sequence Length: 534 Download |
| MEVSLIGSSQ GTFCVGEFAP CRELRLCVPT RNGEALSFFD RSSRRCRNSR LRLNITAGQT 60 EPVRSDSFPV HDSATRPNSI DRVRLFVGLP LDVVSECNSV NHSRAITAGL KALKLLGIEG 120 VELPLWWGLV EKEGKGRYDW SGYLAVAEMV QNADLKLHVS LNFHANNHPK VSLPQWISKI 180 GESNPSIFYR DRSGDVYKDC LSLGVDDLPV LDGETPLQVY KDFCDSFKSS FAHFLGSTVT 240 SVTMGLGPDG ELRYPSHHKL SNNGEFPAGV GEFQCYDKNM MNLLKQHAEA YGFPLWGLGG 300 PHDAPSYNQS PDSNGFFKEL SGSWESPYGD FFLSWYSKQL LSHGDRILSM AFDVFSNSGV 360 AIHGRVPLLH SWYRTRSRAL ENTAGFYNTD SKDGYEAVAE IFARNSCRMM LPGMDLSDDE 420 QPQESMSSPE LLLAQIQAAC KRHGVGVSGM NSKPVSNGFD QIRKNVMGEK DVVDLFSYQR 480 MGAEFFSPEN FPSFTQFARS LSQPATHPDD LPQQKMVESV PSTSESGIEM QTA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 1.0e-83 | 83 | 501 | 434 | + beta-amylase | ||
| PLN02801 | PLN02801 | 1.0e-105 | 83 | 501 | 435 | + beta-amylase | ||
| PLN02161 | PLN02161 | 8.0e-109 | 82 | 502 | 439 | + beta-amylase | ||
| PLN00197 | PLN00197 | 1.0e-118 | 83 | 503 | 434 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 4.0e-127 | 82 | 508 | 435 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD38148.1 | 0 | 84 | 533 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
| EMBL | CAI39245.1 | 0 | 1 | 533 | 1 | 536 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 533 | 1 | 541 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276777.1 | 0 | 1 | 533 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002516865.1 | 0 | 1 | 533 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1q6g_A | 0 | 80 | 501 | 9 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1v3i_A | 0 | 80 | 501 | 9 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1q6d_A | 0 | 80 | 501 | 9 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1b1y_A | 0 | 83 | 530 | 6 | 458 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1wds_A | 0 | 80 | 501 | 9 | 441 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781436 | 410 | 129 | 534 | 0 |
| JG076371 | 256 | 279 | 534 | 0 |
| HO796964 | 393 | 146 | 534 | 0 |
| JG075315 | 240 | 295 | 534 | 0 |
| HO781436 | 87 | 55 | 137 | 1e-20 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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