Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10012818 |
Family | AA3 |
Protein Properties | Length: 741 Molecular Weight: 81783.9 Isoelectric Point: 8.913 |
Chromosome | Chromosome/Scaffold: 1313 Start: 9356 End: 15278 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA3 | 296 | 723 | 0 |
AGESFDYIVVGGGAAGCPLAATLSEKLSVLLIEHGGSPYGNPWIMNKRFYGFPLLQTDEFSSVSQSFTSKEGVVNHRGRVLGGTTALNAGFYSRASNDFA RTAGWDEELVKESYEWVESKIVTKPDQLTTWQAAVKSQFLEAAGILPYNGFTWEHIKGTKLSGSIFDSRGTRHTSADLLQMGRPENIKVLFNPTVKSVIF RNSVLLNATVKSVIFDKGSPQILLLSGIGPKPHLNQLNIPIVLESNQVGRDVKDDPSVSIWVESNPKHQVPDLAPLAGIRKGSDFVIESLTAPFGLNGMG IGVVAAKLAFPESKVKLELNSTDPRKNPQVSYNYLESEKDMDVCVEMTQVLNEVARSRAVERFLGNVAQVNWTRNPDELRTFCRSKLRSFYHYHGGCGVG SVVGQDYRVVGVEGLRVVDGSNFLESPG |
Full Sequence |
---|
Protein Sequence Length: 741 Download |
MKSGWDKQLV KESYEWVESK IVTKPDQLTT WQAAVKSQFL EAAGILPYNG FTWEHIKGTK 60 LSGSIFDSRG TRHTSADLLQ MGRPENIKAE GQPVVSLQPP SPEKFSVLLI ERGGSPYGNP 120 WITEKCFFGF PLLQADEFSS VSQWFISKEG IANHRGRVLG GSTAINGGFY GRASDRFVMK 180 SGWDKQLVKE SYEWVESKIV TKPDQLTTWQ AAVKSQFLEA AGILPYNGFT WEHIKGTKLS 240 GSIFDSRGTR HTSADLLQMG RPENIKVLFN PTVKSVIFRN SGAKFPYMTS NFNEVAGESF 300 DYIVVGGGAA GCPLAATLSE KLSVLLIEHG GSPYGNPWIM NKRFYGFPLL QTDEFSSVSQ 360 SFTSKEGVVN HRGRVLGGTT ALNAGFYSRA SNDFARTAGW DEELVKESYE WVESKIVTKP 420 DQLTTWQAAV KSQFLEAAGI LPYNGFTWEH IKGTKLSGSI FDSRGTRHTS ADLLQMGRPE 480 NIKVLFNPTV KSVIFRNSVL LNATVKSVIF DKGSPQILLL SGIGPKPHLN QLNIPIVLES 540 NQVGRDVKDD PSVSIWVESN PKHQVPDLAP LAGIRKGSDF VIESLTAPFG LNGMGIGVVA 600 AKLAFPESKV KLELNSTDPR KNPQVSYNYL ESEKDMDVCV EMTQVLNEVA RSRAVERFLG 660 NVAQVNWTRN PDELRTFCRS KLRSFYHYHG GCGVGSVVGQ DYRVVGVEGL RVVDGSNFLE 720 SPGMLGRYQG IKILAERENS * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03970 | Rv0697 | 0.006 | 155 | 196 | 45 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PLN02785 | PLN02785 | 3.0e-26 | 2 | 88 | 87 | + Protein HOTHEAD | ||
TIGR03970 | Rv0697 | 1.0e-30 | 301 | 737 | 501 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PLN02785 | PLN02785 | 3.0e-58 | 103 | 286 | 184 | + Protein HOTHEAD | ||
PLN02785 | PLN02785 | 5.0e-127 | 283 | 737 | 551 | + Protein HOTHEAD |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002315047.1 | 6e-26 | 4 | 87 | 118 | 199 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315047.1 | 0 | 103 | 279 | 39 | 213 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315047.1 | 0 | 282 | 736 | 1 | 489 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315048.1 | 0 | 103 | 280 | 70 | 245 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315048.1 | 0 | 282 | 740 | 32 | 529 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 281 | 740 | 5 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3gdp_B | 3e-38 | 103 | 319 | 47 | 269 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3gdp_B | 8e-18 | 5 | 117 | 129 | 243 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3gdp_A | 0 | 281 | 740 | 5 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3gdp_A | 3e-38 | 103 | 319 | 47 | 269 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO796743 | 529 | 301 | 737 | 0 |
HO796743 | 226 | 103 | 319 | 0 |
CV478245 | 249 | 315 | 529 | 0 |
CV478245 | 180 | 103 | 282 | 0 |
HO796743 | 86 | 2 | 87 | 2e-17 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|