| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10012822 |
| Family | GT31 |
| Protein Properties | Length: 631 Molecular Weight: 71134.1 Isoelectric Point: 8.4976 |
| Chromosome | Chromosome/Scaffold: 1313 Start: 19214 End: 21613 |
| Description | galactosyltransferase1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 393 | 577 | 0 |
| KRRMAVRRTWMQYTPVRSGAVAVRFFVGLHKNQIVNAELWNEARTYGDIQLMPFVDYYNLITWKTLGICVFGTQVVSAKYVMKTDDDAFVRVDEVLSSLK NINVNRGLLYGLINSDSRPHRNADSKWFISHEEWRDDKYPPWAHGPGYVISQDIAKSVYNKYKEGRLKMFKLEDVAMGIWINEMK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 631 Download |
| MKKWYGGVLI ASLFMVLILR YGLLKNPIEE GYLVNSLPNA TNPLQWVQST LPLALRSPQN 60 SSQAISTNTI VVGLFARRNL SNEERVSLHT WNLLEGLVNG SQALPNGLDA IKEAVSAWNN 120 LMATVESEKL RYANDSSNRR AKEKQCPHFV NKLNATGLDN NGFRLRLPCG LTQGSSVTII 180 GIPEGLLGNF RIELTGETLP GEPDPPIIYH YNVRLNGDKV TDDPVIVQNT WTAAHDWGDE 240 ERCPPLSPEK IKKVDELDQC NKVVGKNSSK SHDNGRRRSA MVQDGFRSRT YFPFKQGSLS 300 VMTLRVGSEG IQTTVDGKHI TSFAYRETLE PWLVSEVRTS GDLKLISVLA SGLPTVEDSE 360 HSVDLEALKA FPLPTNQSLD LFIGVFSNAN NFKRRMAVRR TWMQYTPVRS GAVAVRFFVG 420 LHKNQIVNAE LWNEARTYGD IQLMPFVDYY NLITWKTLGI CVFGTQVVSA KYVMKTDDDA 480 FVRVDEVLSS LKNINVNRGL LYGLINSDSR PHRNADSKWF ISHEEWRDDK YPPWAHGPGY 540 VISQDIAKSV YNKYKEGRLK MFKLEDVAMG IWINEMKNEG MNVRYEKEER ICNTGCRDGY 600 VVAHYQSPRD MLCLWQKIQQ GNIAKCCGDR * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 7.0e-20 | 168 | 348 | 181 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 2.0e-21 | 162 | 348 | 187 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-23 | 163 | 348 | 186 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 9.0e-38 | 393 | 577 | 191 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 0 | 1 | 630 | 636 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI22225.1 | 0 | 1 | 630 | 1 | 635 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002269607.1 | 0 | 1 | 629 | 1 | 635 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311304.1 | 0 | 1 | 628 | 1 | 647 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316134.1 | 0 | 1 | 630 | 1 | 632 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522444.1 | 0 | 1 | 629 | 3 | 631 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
