Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10012979 |
Family | AA5 |
Protein Properties | Length: 788 Molecular Weight: 87102.8 Isoelectric Point: 6.5416 |
Chromosome | Chromosome/Scaffold: 434 Start: 430163 End: 432762 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 133 | 785 | 0 |
EHAGAPHIHDHQEHAGAPHIHDHQEHAGAPHIHDHQEHAGAPHIHDHQEHAGAPHTEPEAPSPGFVDPTFLNEHKPLGPHEKFGDPFGNPHDYKEKKLPD DFGTKQFQGTDIKDFVGGPVAAPVVEVDSFKGKWELFTDNSGVSAMHTILLPNCEHVLMYDATIWRISKIMLPEGQCRILDQATGEKDCFAHSVLLNIKT AELIPLVLNTDTWCSSGGLTLEGNLISTGGFQGGANTVRYLNNCPKCAWKEDPSALSAPRWYSTQQQLADGRMIVIGGRGAQSYEYIPQEGTSNAKPFFF DFLKQTTDPDENNLYPFVFLSPDKNVFVFANNRSVLLNPYTNAVVKEFPALPGGHRNYPASGMGVLLPLEVHSTSPDDIIDAEVLICGGSAHIDSYTLAS KGMYYEALKDCGRLKITRTHPNWRRELMPTSRIMGDMVILPTGEVLILNGAQRGASGWGFARDPNQIPVLFNYKAPNKQQLFQELAPSNIPRMYHSTSVV LPDGKVLVAGSNTNNGYIYADATFPTELRVEKFSPPYLDPARAQKKPKLEEGGYPKTMTYGQEMTLKITLNEKSFLKKNFKVTIYVPAFTTHGVAMNQRL VILLIKDVVQVGEGKYDVQAMAPPTAAVAPTGYYLLSVVHNGLPTEAVWVQLR |
Full Sequence |
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Protein Sequence Length: 788 Download |
MRLFFFPLCV VVLLFISASA HDHQEHAGVP HTHDHQEHAG APHIHDHQEH AGAPHIHDHQ 60 EHAGAPHIHD HQEHAGAPHI HDHQEHAGAP HIHDHQEHAG APHIHDHQEH AGAPHIHDHQ 120 EHAGAPHIHD HQEHAGAPHI HDHQEHAGAP HIHDHQEHAG APHIHDHQEH AGAPHIHDHQ 180 EHAGAPHTEP EAPSPGFVDP TFLNEHKPLG PHEKFGDPFG NPHDYKEKKL PDDFGTKQFQ 240 GTDIKDFVGG PVAAPVVEVD SFKGKWELFT DNSGVSAMHT ILLPNCEHVL MYDATIWRIS 300 KIMLPEGQCR ILDQATGEKD CFAHSVLLNI KTAELIPLVL NTDTWCSSGG LTLEGNLIST 360 GGFQGGANTV RYLNNCPKCA WKEDPSALSA PRWYSTQQQL ADGRMIVIGG RGAQSYEYIP 420 QEGTSNAKPF FFDFLKQTTD PDENNLYPFV FLSPDKNVFV FANNRSVLLN PYTNAVVKEF 480 PALPGGHRNY PASGMGVLLP LEVHSTSPDD IIDAEVLICG GSAHIDSYTL ASKGMYYEAL 540 KDCGRLKITR THPNWRRELM PTSRIMGDMV ILPTGEVLIL NGAQRGASGW GFARDPNQIP 600 VLFNYKAPNK QQLFQELAPS NIPRMYHSTS VVLPDGKVLV AGSNTNNGYI YADATFPTEL 660 RVEKFSPPYL DPARAQKKPK LEEGGYPKTM TYGQEMTLKI TLNEKSFLKK NFKVTIYVPA 720 FTTHGVAMNQ RLVILLIKDV VQVGEGKYDV QAMAPPTAAV APTGYYLLSV VHNGLPTEAV 780 WVQLREK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04684 | BAF1_ABF1 | 0.006 | 23 | 106 | 84 | + BAF1 / ABF1 chromatin reorganising factor. ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication. ABF1 is known to remodel chromatin, and it is proposed that it mediates its effects on transcription and gene expression by modifying local chromatin architecture. These functions require a conserved stretch of 20 amino acids in the C-terminal region of ABF1 (amino acids 639 to 662 S. cerevisiae). The N-terminal two thirds of the protein are necessary for DNA binding, and the N-terminus (amino acids 9 to 91 in S. cerevisiae) is thought to contain a novel zinc-finger motif which may stabilise the protein structure. | ||
pfam09118 | DUF1929 | 1.0e-13 | 687 | 784 | 99 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 9.0e-15 | 685 | 784 | 101 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-102 | 278 | 521 | 248 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL84955.1 | 0 | 261 | 784 | 74 | 593 | AT5g19580/T20D1_100 [Arabidopsis thaliana] |
RefSeq | NP_197459.1 | 0 | 261 | 784 | 74 | 593 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002324431.1 | 0 | 263 | 785 | 1 | 522 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 201 | 785 | 30 | 609 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514260.1 | 0 | 202 | 785 | 31 | 613 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eid_A | 0.0000000002 | 350 | 786 | 230 | 639 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2wq8_A | 0.000000001 | 350 | 786 | 252 | 661 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eib_A | 0.000000002 | 350 | 786 | 230 | 639 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 1k3i_A | 0.000000002 | 350 | 786 | 247 | 656 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
PDB | 2eic_A | 0.000000002 | 350 | 786 | 230 | 639 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |