Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10013388 |
Family | GH3 |
Protein Properties | Length: 632 Molecular Weight: 68871.6 Isoelectric Point: 8.4317 |
Chromosome | Chromosome/Scaffold: 812 Start: 479596 End: 483018 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 111 | 339 | 0 |
SSRLGIPLMYGVNAVHGHNSAYKATVFPHNVGLGATRDPGLVRRIGAATALEVRATGINYVFAPCIAVCRDPRWGRCYESYSEDPNIVKKMTEIIPGLQG DIPPHWKSGSPYVSGRDKVAACAKHYVGDGGTENGANRGDAVGSFHSLLSIHMPAYLPSVIKGVSTIMTSYSTWNGEKIHNHKFLVTEFLKSTLRFRGFV ISDWKGVERTGNYTDSVHAAISAGIDMVM |
Full Sequence |
---|
Protein Sequence Length: 632 Download |
MGRISIFKLL LFNVTTFVLA MAGAEGNDQY KKYKDPTKPM NLRIRNLMRQ MTLAEKIGQM 60 VQIQKNVATP DLIKNYSIGS VMSDSGSVPS PTATPQEWIT MINGFQTGAI SSRLGIPLMY 120 GVNAVHGHNS AYKATVFPHN VGLGATRDPG LVRRIGAATA LEVRATGINY VFAPCIAVCR 180 DPRWGRCYES YSEDPNIVKK MTEIIPGLQG DIPPHWKSGS PYVSGRDKVA ACAKHYVGDG 240 GTENGANRGD AVGSFHSLLS IHMPAYLPSV IKGVSTIMTS YSTWNGEKIH NHKFLVTEFL 300 KSTLRFRGFV ISDWKGVERT GNYTDSVHAA ISAGIDMVMD PDDHTQFIKV LTELVNQKSI 360 PMARIDDAVA RILRVKFAMG LFENPWADET YVDHLGSQTH RNLAREAVRK SLVLLKNGDN 420 KTGPMLPLPK HSHRILVAGT HANNLGFQCG GWTISHQGET GNNYTTGTTI LSGITSTVDP 480 TTEIFFHTNP PADFIEANNF SYSIVVVGEI PYAESQGDNG NLTIPEGGLN AINNVCEWTK 540 CVVVLVSGRP LVIQPYLSKI TALVAAWLPG TEGQGIADVL YGDYGFTGKL PRTWFKSVRQ 600 LPMNVGDKNY DPLFPFGFGI GTKPVGSDDD S* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-32 | 35 | 612 | 618 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-43 | 412 | 620 | 224 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-75 | 44 | 620 | 657 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 8.0e-82 | 52 | 375 | 331 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 5.0e-85 | 51 | 456 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63654.1 | 0 | 31 | 625 | 6 | 605 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266589.1 | 0 | 1 | 625 | 1 | 625 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 1 | 625 | 1 | 625 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002271545.1 | 0 | 25 | 627 | 19 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002523937.1 | 0 | 1 | 624 | 1 | 621 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 30 | 622 | 2 | 599 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1iex_A | 0 | 30 | 622 | 2 | 599 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1iew_A | 0 | 30 | 622 | 2 | 599 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1iev_A | 0 | 30 | 622 | 2 | 599 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ieq_A | 0 | 30 | 622 | 2 | 599 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |