Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10013390 |
Family | GH3 |
Protein Properties | Length: 622 Molecular Weight: 67131.4 Isoelectric Point: 9.2 |
Chromosome | Chromosome/Scaffold: 812 Start: 487362 End: 491252 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 109 | 335 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGIGDATAKEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHTIVQKMTEIIPGLQGDIPANSRKG VPFVDNGGTKVAACAKHYVGDGGTTKGINENNTVVSSNGLMSIHMPAYFNSISKGVATVMVSYSSWNGKKMHANRELVTGFLKEKMKFRGFVISDWQGID RITSPPHVNYSSSVTAGVSAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 622 Download |
MGRASFARSS ILLLLLAVLL AAEASGTNYL KYKDPKQPVG ARIKDLLKRM TVEEKIGQMV 60 QIDRLVSSPD VMKKYFLGSV LSGGGSVPAK KASAEQWVDM VNGLQKGALS TRLGIPMIYG 120 IDAVHGHNNV YKATIFPHNV GLGIGDATAK EVRATGIPYA FAPCIAVCRD PRWGRCYESY 180 SEDHTIVQKM TEIIPGLQGD IPANSRKGVP FVDNGGTKVA ACAKHYVGDG GTTKGINENN 240 TVVSSNGLMS IHMPAYFNSI SKGVATVMVS YSSWNGKKMH ANRELVTGFL KEKMKFRGFV 300 ISDWQGIDRI TSPPHVNYSS SVTAGVSAGI DMVMVAYNYT EFIDILTYQV KNKIIPMSRI 360 DDAVQRILRV KFIMGLFEKP IADYSLANEI GKQEHRDIAR EAVRKSLVLL KNGKAAKPLL 420 PLPKKAPKIL VAGSHADNLG NQCGGWTIEW QGVTGNDVTA GTTILNAVKS AVDTTTEVVY 480 SERPDTNFVK SNKFSYAIVV VGEPPYAETQ GDSLNLTIPE AGLSTINNVC GSVQCVVVLV 540 TGRPVVIQPH LAKIDALVAA WLPGSEGQGV TDVLFGDYGF TGKLARTWFK SVDQLPMNVG 600 DPHYNPLFPF GFGLTTEPVE G* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 4.0e-24 | 112 | 598 | 552 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-33 | 433 | 615 | 201 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-63 | 35 | 615 | 663 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-69 | 50 | 408 | 376 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-80 | 51 | 370 | 334 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 29 | 620 | 25 | 626 | beta-D-glucosidase [Gossypium hirsutum] |
RefSeq | XP_002278363.1 | 0 | 12 | 620 | 8 | 626 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002278377.1 | 0 | 12 | 620 | 8 | 627 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002313632.1 | 0 | 12 | 620 | 11 | 626 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 27 | 620 | 27 | 631 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 28 | 616 | 1 | 599 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1x38_A | 0 | 28 | 616 | 1 | 599 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1lq2_A | 0 | 28 | 616 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 28 | 616 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 28 | 616 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |