Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10013465 |
Family | CBM43 |
Protein Properties | Length: 499 Molecular Weight: 52937.2 Isoelectric Point: 5.1305 |
Chromosome | Chromosome/Scaffold: 230 Start: 331651 End: 334521 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 443 | 9.9e-31 |
CAAKEGADRKMLQAALDWACGPGRVDCSPMLQGEPCYEPDNVIAHATFAFNAYYQRMAKSPGTCDFKGVAAVTTTDPSHGSC | |||
GH17 | 24 | 343 | 0 |
IGVNIGTSLSDMPSPTQVVALLKAQNIRHVRLYDADRAMLIALANTGIHVTVSVPNDQILGIGQSNATAANWVSRNIIAHVPATNITAIAVGSEVLTTLP NAAPVLVSALKFIYSALVAANLDSQIKVSTPHSSSIILDSFPPSQAFFNRTWNPVMVPLLKFLQSAGSPMMLNVYPYYDYMQANGVIPLDYALFRPLQPN KEAVDSNTLLHYTNVFDALVDAAYFAMSELNFTNVPVVVTETGWPSKGDSSEPDATADNANTYNSNLIRHVLNNTGTPKHPGIAISTFIYELYNEDTRSG AVSEKNWGLFDANGVPIYIL |
Full Sequence |
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Protein Sequence Length: 499 Download |
MAALFLLLCL LAATSVSAAE ESAIGVNIGT SLSDMPSPTQ VVALLKAQNI RHVRLYDADR 60 AMLIALANTG IHVTVSVPND QILGIGQSNA TAANWVSRNI IAHVPATNIT AIAVGSEVLT 120 TLPNAAPVLV SALKFIYSAL VAANLDSQIK VSTPHSSSII LDSFPPSQAF FNRTWNPVMV 180 PLLKFLQSAG SPMMLNVYPY YDYMQANGVI PLDYALFRPL QPNKEAVDSN TLLHYTNVFD 240 ALVDAAYFAM SELNFTNVPV VVTETGWPSK GDSSEPDATA DNANTYNSNL IRHVLNNTGT 300 PKHPGIAIST FIYELYNEDT RSGAVSEKNW GLFDANGVPI YILHLTGAGT VLANDTTNQT 360 FCAAKEGADR KMLQAALDWA CGPGRVDCSP MLQGEPCYEP DNVIAHATFA FNAYYQRMAK 420 SPGTCDFKGV AAVTTTDPSH GSCIVPGSAG GNGTFTNTTA LAPSSNSTTT SGCPVPYFAP 480 FRAGSFMTMC ILLVSIVL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 256 | 336 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-18 | 360 | 431 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-37 | 360 | 444 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-92 | 24 | 341 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26850.1 | 0 | 18 | 463 | 17 | 462 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33479.1 | 0 | 16 | 471 | 14 | 467 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002312452.1 | 0 | 24 | 494 | 4 | 471 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314794.1 | 0 | 4 | 497 | 1 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 1 | 463 | 1 | 462 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 341 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 24 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 24 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 24 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 24 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |