| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10013556 |
| Family | AA1 |
| Protein Properties | Length: 409 Molecular Weight: 46295.8 Isoelectric Point: 10.0277 |
| Chromosome | Chromosome/Scaffold: 62 Start: 146337 End: 147993 |
| Description | SKU5 similar 18 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 33 | 358 | 0 |
| EQGKHLPHPDGILINGHGPNRFNLGFQPGATYRLRISNVGTRTSLNFRIQDHPLLLVETEGSYTVKKYYNSLDIHVGQSYSVLVTAKSRNIHGKSYNMFA SSRFTASRIFGVGVVYYPDSNRPPSAPLHSRPSAFDYHFSIKQARSIKWDLEVGAARTNPQGSYHYGSINVSRTLVLENNLIVDGSNKLRYTVNGVSFVH PDTPLKLADRFKMFDELKTVVVPPIPYVPQKKIQQLLGTSVVDVKWRDFYHLVFQNPLPYLQTWHLDGYNFFVVGMGAGSWNESSDKATYNLVDAVSRST VQVYPRGWTAILVMLDNRGIWNLRSQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 409 Download |
| MEFKEQTVRF SLAKTGLTVS RLRTKLNLRG LLEQGKHLPH PDGILINGHG PNRFNLGFQP 60 GATYRLRISN VGTRTSLNFR IQDHPLLLVE TEGSYTVKKY YNSLDIHVGQ SYSVLVTAKS 120 RNIHGKSYNM FASSRFTASR IFGVGVVYYP DSNRPPSAPL HSRPSAFDYH FSIKQARSIK 180 WDLEVGAART NPQGSYHYGS INVSRTLVLE NNLIVDGSNK LRYTVNGVSF VHPDTPLKLA 240 DRFKMFDELK TVVVPPIPYV PQKKIQQLLG TSVVDVKWRD FYHLVFQNPL PYLQTWHLDG 300 YNFFVVGMGA GSWNESSDKA TYNLVDAVSR STVQVYPRGW TAILVMLDNR GIWNLRSQNA 360 EKWYLGQELY LRVKGSGAED PMSIPERDES PIPQNAILCG RVMNLTYY* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 2.0e-109 | 27 | 401 | 376 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 1.0e-110 | 23 | 404 | 384 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 3.0e-111 | 28 | 403 | 377 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 3.0e-121 | 28 | 405 | 388 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 28 | 402 | 376 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF26773.2 | 0 | 28 | 402 | 141 | 510 | AC007396_22 T4O12.2 [Arabidopsis thaliana] |
| GenBank | AAF87105.1 | 0 | 28 | 402 | 128 | 497 | AC006434_1 F10A5.2 [Arabidopsis thaliana] |
| GenBank | AAM67203.1 | 0 | 28 | 402 | 175 | 544 | pectinesterase, putative [Arabidopsis thaliana] |
| RefSeq | NP_177707.1 | 0 | 28 | 402 | 175 | 544 | sks18 (SKU5 Similar 18); copper ion binding / pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002300700.1 | 0 | 27 | 405 | 169 | 541 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 9e-28 | 60 | 400 | 210 | 539 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1asq_A | 9e-28 | 60 | 400 | 210 | 539 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1asp_B | 9e-28 | 60 | 400 | 210 | 539 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1asp_A | 9e-28 | 60 | 400 | 210 | 539 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1aso_B | 9e-28 | 60 | 400 | 210 | 539 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO796073 | 400 | 23 | 405 | 0 |
| EX768912 | 239 | 166 | 403 | 0 |
| HO801725 | 378 | 28 | 403 | 0 |
| HO852795 | 358 | 48 | 400 | 0 |
| DT594873 | 245 | 158 | 400 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
