| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10013646 |
| Family | GH3 |
| Protein Properties | Length: 628 Molecular Weight: 68297.4 Isoelectric Point: 6.6281 |
| Chromosome | Chromosome/Scaffold: 317 Start: 278460 End: 281029 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 108 | 342 | 0 |
| STRLGIPMIYGIDAVHGHNNVYNATIFPHNIGLGATREPELAKRIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPEIVKAMTELVNGLQG DLPANSHKGVPYVAGKKKVAACAKHFVGDGGTVDGINENNTIIDWHGLMNIHMPGYYTSIIKGVSSVMVSYSSWNGIKMHANKKMVTDFLKGTLRFRGFV ISDWEGIDRITSPPHANYTYSVEKAITAGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 628 Download |
| MSCSNLIEQL LGIVVAMLLL SASTADAAHY KDPKQPVGAR IKDLISRMTL QEKIGQMVQI 60 DRQVASPDVM KNYFIGSLLS GGGSVPAEKA SPQQWIKMIN DFQNGSLSTR LGIPMIYGID 120 AVHGHNNVYN ATIFPHNIGL GATREPELAK RIGAATALEV RATGIPYAFA PCIAVCRDPR 180 WGRCYESYSE DPEIVKAMTE LVNGLQGDLP ANSHKGVPYV AGKKKVAACA KHFVGDGGTV 240 DGINENNTII DWHGLMNIHM PGYYTSIIKG VSSVMVSYSS WNGIKMHANK KMVTDFLKGT 300 LRFRGFVISD WEGIDRITSP PHANYTYSVE KAITAGIDMV MVPLNYTEFI DDLTMLVNKG 360 FIPMSRIDDA VKRILRVKFV MGLFEDPMAD ESLIHELGSK EHRELAREAV RKSLVLLKNG 420 KDANQPLLPL PKKAAKILVA GAHADNLGFQ CGGWAIEWQG FSGNDRTSGT TILSAIKSTV 480 DPNTEVLYQE NPAEDYVKSN NFSYAIVVVG EHPYAETMGD SLNLTIPSPG PSNIQNVCSA 540 VKCVVVVISG RPVVIEPYVS SMDAIVAAWL PGTEGQGVAD VLFGDYGFTG KLPRTWFKSV 600 DQLPMNVGDK NYDPLYSFGF GLTTEPV* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PRK15098 | PRK15098 | 2.0e-11 | 563 | 623 | 83 | + beta-D-glucoside glucohydrolase; Provisional |
| pfam01915 | Glyco_hydro_3_C | 5.0e-33 | 414 | 623 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| PRK15098 | PRK15098 | 1.0e-58 | 10 | 488 | 513 | + beta-D-glucoside glucohydrolase; Provisional |
| COG1472 | BglX | 2.0e-77 | 48 | 456 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
| pfam00933 | Glyco_hydro_3 | 5.0e-84 | 49 | 377 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95015.1 | 0 | 10 | 626 | 8 | 622 | unknown [Populus trichocarpa] |
| EMBL | CBI39076.1 | 0 | 30 | 626 | 28 | 632 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002266470.1 | 0 | 30 | 626 | 28 | 624 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319151.1 | 0 | 30 | 626 | 3 | 599 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525724.1 | 0 | 13 | 627 | 7 | 623 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 26 | 624 | 1 | 599 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1x38_A | 0 | 26 | 624 | 1 | 599 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1lq2_A | 0 | 26 | 624 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 26 | 624 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 26 | 624 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
