| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10013720 |
| Family | CE8 |
| Protein Properties | Length: 387 Molecular Weight: 41247 Isoelectric Point: 9.9815 |
| Chromosome | Chromosome/Scaffold: 1168 Start: 212633 End: 213793 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 283 | 370 | 7.4e-24 |
| ATVCKEGCDYKTVQAAVDAAPNNLPSGKKFVIKIKEGVYKEIVRVPLEKRNLVFLGDGIGKTVITGSLAVGQPGISTYNTATVGKPSS | |||
| Full Sequence |
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| Protein Sequence Length: 387 Download |
| MPPTPPPSKK YSKFPSTTTI SLHHIFMASL LTLLLVSFLL FLSFPSSSSS LSQPRSLRIF 60 RSPKPKPKSK PPVTRSSSAA PIPAQILQAC KATRFPDVCQ SSLAANSPSK TQQTPIDLIQ 120 SAISLSSANL SAAQSMVKSI LDSSSGNINR TTAANNCIEA LANSKYRTDS AAAVEALRRF 180 GGGGIKDARA WLSASLLYQY DCWNALKYAN DTSETAQTMS FIDALQTLTS NALSLIVSYD 240 IHGNETGSWA PPKTERDGFW EESSVGSENH PGPGFPPGLN TDATVCKEGC DYKTVQAAVD 300 AAPNNLPSGK KFVIKIKEGV YKEIVRVPLE KRNLVFLGDG IGKTVITGSL AVGQPGISTY 360 NTATVGKPSS PLNFSRTILF VNGPKR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02313 | PLN02313 | 2.0e-18 | 84 | 386 | 333 | + Pectinesterase/pectinesterase inhibitor | ||
| PLN02990 | PLN02990 | 6.0e-20 | 90 | 365 | 293 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-21 | 153 | 365 | 225 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 7.0e-31 | 282 | 386 | 109 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 9.0e-132 | 79 | 366 | 293 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002275192.1 | 0 | 85 | 366 | 39 | 317 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002281640.1 | 0 | 67 | 366 | 32 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 56 | 366 | 23 | 331 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 64 | 366 | 39 | 337 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 61 | 366 | 24 | 325 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.00000000000002 | 291 | 382 | 18 | 105 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.000000002 | 282 | 365 | 4 | 85 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 20 | 42 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG663564 | 280 | 83 | 358 | 0 |
| DT558541 | 239 | 136 | 372 | 0 |
| GW835109 | 234 | 136 | 365 | 0 |
| DT547464 | 283 | 84 | 364 | 0 |
| DY284851 | 292 | 89 | 374 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Brassica rapa | Bra034569 | ||||
| Picea abies | MA_10629g0010 | MA_10430460g0010.217.314 | MA_10430460g0010.217.314 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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