| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10013721 |
| Family | CE8 |
| Protein Properties | Length: 219 Molecular Weight: 24688.7 Isoelectric Point: 4.6512 |
| Chromosome | Chromosome/Scaffold: 1168 Start: 218416 End: 219314 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 50 | 211 | 0 |
| DCQLRGNVDFIFGNSAAIFDDCTILVAPRQVMPDKGENNAVTAQGRTDPAQSTGFVFHNCLINGTEEYMRLYRSNPKVHKNFLGRPWKEYSRTVFIRCNM EALVSAPGWMPWSGDFALATLYYGEFENSGDGGSDWSQRVSWSSQVPKEHVDAYSVDNFIQG | |||
| Full Sequence |
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| Protein Sequence Length: 219 Download |
| MFSFIDQAQV YTIDEKENDK TRRIKISANI AGLEMFAGLE MLLLNSQELD CQLRGNVDFI 60 FGNSAAIFDD CTILVAPRQV MPDKGENNAV TAQGRTDPAQ STGFVFHNCL INGTEEYMRL 120 YRSNPKVHKN FLGRPWKEYS RTVFIRCNME ALVSAPGWMP WSGDFALATL YYGEFENSGD 180 GGSDWSQRVS WSSQVPKEHV DAYSVDNFIQ GNQWIPTI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02990 | PLN02990 | 6.0e-47 | 50 | 216 | 169 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 4.0e-47 | 50 | 216 | 169 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 7.0e-57 | 50 | 217 | 174 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-69 | 50 | 212 | 166 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 2.0e-117 | 51 | 218 | 168 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ85775.1 | 0 | 51 | 215 | 54 | 217 | unknown [Medicago truncatula] |
| EMBL | CBI37561.1 | 0 | 51 | 218 | 230 | 396 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002275192.1 | 0 | 51 | 218 | 377 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 51 | 217 | 391 | 556 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 51 | 217 | 397 | 562 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-38 | 49 | 215 | 148 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-36 | 50 | 215 | 145 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt9_B | 0.0002 | 50 | 163 | 167 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt9_A | 0.0002 | 50 | 163 | 167 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt6_B | 0.0002 | 50 | 163 | 167 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| JG265943 | 169 | 51 | 219 | 0 |
| JG073132 | 169 | 51 | 219 | 0 |
| CV270349 | 167 | 51 | 217 | 0 |
| JG139915 | 143 | 64 | 206 | 0 |
| DT513104 | 167 | 51 | 217 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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