| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10013800 |
| Family | AA1 |
| Protein Properties | Length: 419 Molecular Weight: 46171.4 Isoelectric Point: 9.5818 |
| Chromosome | Chromosome/Scaffold: 618 Start: 6275 End: 10336 |
| Description | laccase 11 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 192 | 397 | 8e-32 |
| VPVENKTVSAILQYKGISTTILPKLPTLLASNDTKFALAYAGKLRSLNTAQFPAIVKVNRKLFYTIGLGENPCATCQNGTKISASLNNITFVMQKTDLLQ AHYFNMSGVFKTDFPDRPSKTFNYTRVPLTANLATSLGTRLRRIPFNTTVELVLQDTNLLTVESHPYHLHGYNFFVIGTGIGNFDPAKDPAKYNLVDPSK RNTVQL | |||
| Full Sequence |
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| Protein Sequence Length: 419 Download |
| MELVESEIIR QSPSPLSRFK RICVFCGSSQ GKKSSYQDAA IELGQELVSR NIDLVYGGGS 60 IGLMGLVSQA VHDGGRHVIG VIPKTLMPRE LTGETVGEVK AVADMHQRKA EMAKRSDAFI 120 ALPGGYGTLE ELLEVITWAQ LGIHDKPHSH KLYKIYIVYG IRGRILIYVL VRADQIPDRY 180 FMAAKPFMDV RVPVENKTVS AILQYKGIST TILPKLPTLL ASNDTKFALA YAGKLRSLNT 240 AQFPAIVKVN RKLFYTIGLG ENPCATCQNG TKISASLNNI TFVMQKTDLL QAHYFNMSGV 300 FKTDFPDRPS KTFNYTRVPL TANLATSLGT RLRRIPFNTT VELVLQDTNL LTVESHPYHL 360 HGYNFFVIGT GIGNFDPAKD PAKYNLVDPS KRNTVQLEDG LLSGLELIIP TSGSYTVT* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03388 | ascorbase | 1.0e-27 | 169 | 395 | 237 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| COG1611 | COG1611 | 6.0e-41 | 20 | 144 | 126 | + Predicted Rossmann fold nucleotide-binding protein [General function prediction only] | ||
| pfam03641 | Lysine_decarbox | 4.0e-42 | 64 | 147 | 84 | + Possible lysine decarboxylase. The members of this family share a highly conserved motif PGGXGTXXE that is probably functionally important. This family includes proteins annotated as lysine decarboxylases, although the evidence for this is not clear. | ||
| TIGR00730 | TIGR00730 | 3.0e-44 | 20 | 147 | 128 | + TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by This model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions [Hypothetical proteins, Conserved]. | ||
| TIGR03389 | laccase | 2.0e-114 | 169 | 395 | 233 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01776.1 | 0 | 169 | 415 | 51 | 299 | laccase (diphenol oxidase)-like protein [Arabidopsis thaliana] |
| EMBL | CBI17500.1 | 0 | 36 | 415 | 141 | 502 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI32739.1 | 0 | 36 | 415 | 161 | 522 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002266464.1 | 0 | 36 | 415 | 162 | 523 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002519529.1 | 0 | 27 | 415 | 149 | 519 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2q4o_B | 0 | 17 | 147 | 11 | 141 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 2q4o_A | 0 | 17 | 147 | 11 | 141 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 2a33_B | 0 | 17 | 147 | 11 | 141 | A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene At2g37210 |
| PDB | 2a33_A | 0 | 17 | 147 | 11 | 141 | A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene At2g37210 |
| PDB | 2q4d_B | 0 | 17 | 146 | 7 | 136 | A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene At2g37210 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX130854 | 241 | 169 | 407 | 0 |
| ES277093 | 231 | 169 | 395 | 0 |
| GO984408 | 228 | 169 | 394 | 0 |
| EY949386 | 216 | 194 | 407 | 0 |
| FC458441 | 213 | 169 | 379 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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