| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10013994 |
| Family | CBM57 |
| Protein Properties | Length: 612 Molecular Weight: 66886.3 Isoelectric Point: 7.0921 |
| Chromosome | Chromosome/Scaffold: 820 Start: 437425 End: 439828 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 198 | 344 | 6.2e-25 |
| GDQWGGDRFWGPITSFSQSSDQARSTEGGIKQASNAPNFYPEALYQTAIVSTDAQPDLEYTMDIEPNRNYSIWLHFAEIDATVTNVGERVFDILINGDVA FKEVDVMKMSGAHHTAVVLNTTVPIDGRSLTITLSPTQGNHAIINAI | |||
| Full Sequence |
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| Protein Sequence Length: 612 Download |
| MFLASCAAPW IIRISCGSRV NVNTEPTNTR WYKDFAYTGG IPSNRTTPPS FLTPPLKTLR 60 YFPLSAGPNN CYNIHRVPKG HYTVRVFFGL IDHPDFNDEA LFDVSVQGTQ VYSLQSGWSG 120 QDDQTFVEAQ VFLLDGTSSI CFHSTGHGDP AIVSIEILQI DNEAYNYGPG WGQGVMMRTV 180 KRLSCGNGKP RFDVGYSGDQ WGGDRFWGPI TSFSQSSDQA RSTEGGIKQA SNAPNFYPEA 240 LYQTAIVSTD AQPDLEYTMD IEPNRNYSIW LHFAEIDATV TNVGERVFDI LINGDVAFKE 300 VDVMKMSGAH HTAVVLNTTV PIDGRSLTIT LSPTQGNHAI INAIEIFEVF RAESKTLSQE 360 VAALQKLKIA LGLPLRFGWN GDPCVPQQHP WSGANCQFDS TSFRWFIDGL DLDNQGLRGF 420 LPDDIYKLQY LQSINLSGNS IHSSMPSTIG NISSLELLDF SYNLFNGSIP ESLGQLSNLR 480 RLNLNGNHLS GRVPAALGGR LLSGASFNFT DNSGLCGAPG LPTCGPRLTA GAKTGIAFGA 540 SFGFLLIVAC VTCWCKRRQN ILRAKQIAAR GAPYAKKRTH LSHDIQLSRP HYNNTGHHAR 600 TAAENGPSLL S* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.0006 | 11 | 155 | 161 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 3.0e-7 | 358 | 470 | 118 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-16 | 182 | 344 | 175 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 3.0e-64 | 14 | 349 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 2 | 611 | 612 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 8 | 611 | 23 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 8 | 611 | 25 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002279791.1 | 0 | 12 | 611 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 12 | 611 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 611 | 14 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 0.00000000000006 | 382 | 526 | 608 | 747 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| PDB | 3rj0_A | 0.0000007 | 407 | 515 | 465 | 580 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| PDB | 3rj0_A | 0.000001 | 417 | 498 | 451 | 532 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| PDB | 3rj0_A | 0.000003 | 410 | 497 | 396 | 483 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| PDB | 3rj0_A | 0.00001 | 431 | 497 | 393 | 459 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
