Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10014126 |
Family | GH35 |
Protein Properties | Length: 829 Molecular Weight: 93861.1 Isoelectric Point: 8.7235 |
Chromosome | Chromosome/Scaffold: 1247 Start: 513302 End: 517535 |
Description | glycosyl hydrolase family 35 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 38 | 342 | 0 |
LIINGKRRLLFSGSIHYPRSTPDMWPDLLGKAKRGGLNVIQTYVFWNVHEPIQGQYNFQGRNDIVKFIRTIGEMGMYATIRVGPFIEAEWNHGGFPFWLR EVKNITFRTDNPPFKYHMRKFVEMIVEKLKGERLFASQGGPIIMSQVENEYGNVEGVFKDSGSRYVQWAGTMVQRLETGVPWTMCKQIDAPDPLINTCNG RHCGNTFFGPNRPNKPSLWTENWTSHYTVFGDPQHYRRSEELAFSVARWFAGNGTHVNYYMYYGGTNFGRTTSPFSTTQYYDEAPVDEYGLEREPKWGHL KDLHR |
Full Sequence |
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Protein Sequence Length: 829 Download |
MASIVGAMIT TLLVVVLFSS SAAATEEEKG VRYDGRSLII NGKRRLLFSG SIHYPRSTPD 60 MWPDLLGKAK RGGLNVIQTY VFWNVHEPIQ GQYNFQGRND IVKFIRTIGE MGMYATIRVG 120 PFIEAEWNHG GFPFWLREVK NITFRTDNPP FKYHMRKFVE MIVEKLKGER LFASQGGPII 180 MSQVENEYGN VEGVFKDSGS RYVQWAGTMV QRLETGVPWT MCKQIDAPDP LINTCNGRHC 240 GNTFFGPNRP NKPSLWTENW TSHYTVFGDP QHYRRSEELA FSVARWFAGN GTHVNYYMYY 300 GGTNFGRTTS PFSTTQYYDE APVDEYGLER EPKWGHLKDL HRALKLSQKA LLWGNPSVWM 360 LSEDVEVCVY DFPRKNVCAA FLTNNNTKLG ATVEFRGKEY YLPSSSVSIL PDCKTVVYNT 420 NTVVSQHNAR NFVRSRLANL KLKWEMYREV IPTQLGHTSL QPHELYNLTK DTTDYAWYTT 480 KIHVEEEDLA MERSSLELHV ASLGHAMVAF VNGEFVGAAH GSHVEKSFVL KAPINLKPAE 540 TNSITLLGSI MGLPDSGAYM ERRYAGPRGV SIIGMKSGRL DLSSNGWGHQ VGLDAEKAEV 600 YTEDGSRRVK WIPIQKQRRS LTWYKTYFYA PEGRNPVAVR MTGMGKGMVW INGNSIGRYW 660 MSYLSPLGQP TQSEYHIPRS FLKRRWNLMV ILEEEEGANL EKIEILTVDR NTICSDIAED 720 HIPTVKSWGR QQGQILKLVD KVQPEAQLRC PLHKKIVSID FSSFGDPKGT CGSYAIGNCS 780 SPLSESIVHK LCIGKNGCDI PVERKLFDGI EDHCQQMQKR LAVQVKCG* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam02449 | Glyco_hydro_42 | 3.0e-6 | 53 | 189 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
pfam02140 | Gal_Lectin | 2.0e-13 | 748 | 827 | 83 | + Galactose binding lectin domain. |
COG1874 | LacA | 4.0e-21 | 31 | 192 | 169 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
pfam01301 | Glyco_hydro_35 | 8.0e-145 | 37 | 344 | 322 | + Glycosyl hydrolases family 35. |
PLN03059 | PLN03059 | 0 | 12 | 827 | 844 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS76480.1 | 0 | 30 | 828 | 48 | 843 | beta-galactosidase [Gossypium hirsutum] |
GenBank | ACC60982.1 | 0 | 23 | 828 | 20 | 827 | beta-galactosidase 2 precursor [Petunia x hybrida] |
RefSeq | XP_002278545.1 | 0 | 7 | 828 | 7 | 830 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306183.1 | 0 | 23 | 827 | 23 | 826 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312963.1 | 0 | 27 | 827 | 27 | 825 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 4.00001e-40 | 37 | 340 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-38 | 24 | 327 | 4 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-38 | 24 | 327 | 4 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |