Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10014184 |
Family | GH5 |
Protein Properties | Length: 448 Molecular Weight: 50805.3 Isoelectric Point: 6.7031 |
Chromosome | Chromosome/Scaffold: 231 Start: 298624 End: 300414 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 58 | 392 | 9.8e-38 |
NDQPFYVNGFNTYWLMVLSADQSTRTKVSQLFQQASSVGLTVCRTWAFNDGQWRALQKSPGVYDEDVFKALDFVVSEANKYKIRLILSLTNNWDAYGGKA QYVKWGKEAGFNLTSDDDFFSHPTLRSYYKAHVKMVLTRVNTITNVTYKEDPTIFAWELMNEPRCTSDPSGDKLQSWIQEMAVYVKSMDPKHLVEIGLEG FYGPSTPDRAQFNPNTYATQVGTDFIRNHQVLGVDFASVHMYADSWISQTISDTHVQFTKSWMQAHIEDAEKYLGMPVVFTEFGVSTKDQGYNSSFRDSL YKTVYQTLLNSTRKGGSGAGSLMWQLFPEGTDYMD |
Full Sequence |
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Protein Sequence Length: 448 Download |
MGHRFRLTSL FLPVLLIIVS PSHARSDAPG SRIDHDHDVE GDEGWEMVAK KGNQFVLNDQ 60 PFYVNGFNTY WLMVLSADQS TRTKVSQLFQ QASSVGLTVC RTWAFNDGQW RALQKSPGVY 120 DEDVFKALDF VVSEANKYKI RLILSLTNNW DAYGGKAQYV KWGKEAGFNL TSDDDFFSHP 180 TLRSYYKAHV KMVLTRVNTI TNVTYKEDPT IFAWELMNEP RCTSDPSGDK LQSWIQEMAV 240 YVKSMDPKHL VEIGLEGFYG PSTPDRAQFN PNTYATQVGT DFIRNHQVLG VDFASVHMYA 300 DSWISQTISD THVQFTKSWM QAHIEDAEKY LGMPVVFTEF GVSTKDQGYN SSFRDSLYKT 360 VYQTLLNSTR KGGSGAGSLM WQLFPEGTDY MDDGYAIVLS KSPSTSNMIS LHSTRIAIFN 420 SLCSWKCKWG CKKKKSTLQE ILYHDEL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.005 | 204 | 299 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
COG2730 | BglC | 0.001 | 101 | 399 | 322 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 4.0e-6 | 117 | 350 | 238 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 9.0e-27 | 89 | 389 | 303 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19893.1 | 0 | 42 | 447 | 58 | 462 | unknown [Glycine max] |
EMBL | CBI18019.1 | 0 | 41 | 447 | 66 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273389.1 | 0 | 41 | 447 | 5 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323680.1 | 0 | 32 | 447 | 3 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 37 | 447 | 63 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 46 | 417 | 5 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 56 | 406 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 56 | 406 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 56 | 406 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 56 | 406 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |