Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10014278 |
Family | GH35 |
Protein Properties | Length: 651 Molecular Weight: 72077.9 Isoelectric Point: 7.24 |
Chromosome | Chromosome/Scaffold: 275 Start: 191300 End: 195381 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 38 | 283 | 0 |
VINGERRILFSGSIHYPRSIPDMWEDLIQKAKDGGVDVIETYVFWNVHELSPGNYNFEGRNDLVRFIKTIHKAGLFAHLRIGPYVCAEWNFGGFPVWLKY IPGISFRTDNEPFKRAMQGFTEKIVGLMKSESLFESQGGPIILSQIENEYGAQSKMLGADGYNYMSWAANMAVKMGTGVPWVMCKEDDAPDPVINTCNGF YCDTFAPNKPYKPTLWTEAWSGWFSEFGGPNHQRPVEDLAFAVARV |
Full Sequence |
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Protein Sequence Length: 651 Download |
MGTQSFSSKL VLLLWCLFGL VGSMHVEATV TYDRKAIVIN GERRILFSGS IHYPRSIPDM 60 WEDLIQKAKD GGVDVIETYV FWNVHELSPG NYNFEGRNDL VRFIKTIHKA GLFAHLRIGP 120 YVCAEWNFGG FPVWLKYIPG ISFRTDNEPF KRAMQGFTEK IVGLMKSESL FESQGGPIIL 180 SQIENEYGAQ SKMLGADGYN YMSWAANMAV KMGTGVPWVM CKEDDAPDPV INTCNGFYCD 240 TFAPNKPYKP TLWTEAWSGW FSEFGGPNHQ RPVEDLAFAV ARVDIDASEA FLHGGELPTL 300 IVQSSGHAVH VFINGELSGS AFGTREDRKF TYRGKVNLRS RMNKIALLSV AVGLPNVGGH 360 FETWYTGVSG PVVIHGLDHG KLDLSWQTWS YQVGLKGEAL NLLSPTGVSS VEWMQSAEKQ 420 QQPLRWHKSH FNAPEGDEPL ALDLEGMGKG QIWINGQSIG RYWTAYATGQ CNGCSYTGSF 480 RPPKCQLGCG QPTQRWYHVP RSWLKPTQNL LVVFEELGGD PSSISLVKRS VTTVCAEVAE 540 FHPTLENWQI EENGRTEEFH SPKVHLRCNK GQSISSIKFA SFGTPLGTCG SYQQGTCHAS 600 TSSNILEKNC IGKQRCAVTI ANSNFGQDPC PNVLKRLSVE AVCAPTNLKV * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 4.0e-18 | 30 | 188 | 169 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 7.0e-24 | 566 | 643 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-125 | 36 | 283 | 260 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 1.0e-148 | 25 | 282 | 258 | + beta-galactosidase; Provisional | ||
PLN03059 | PLN03059 | 2.0e-157 | 268 | 644 | 379 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 8 | 282 | 7 | 280 | beta-galactosidase [Prunus persica] |
GenBank | AAW47739.1 | 0 | 268 | 645 | 463 | 841 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 268 | 645 | 463 | 842 | beta-D-galactosidase [Pyrus pyrifolia] |
RefSeq | XP_002310279.1 | 0 | 1 | 350 | 1 | 351 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002310279.1 | 0 | 268 | 649 | 463 | 846 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 6e-36 | 27 | 295 | 5 | 282 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0002 | 299 | 534 | 399 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-28 | 30 | 290 | 11 | 278 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-28 | 30 | 290 | 11 | 278 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |