Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10014338 |
Family | CE8 |
Protein Properties | Length: 317 Molecular Weight: 35392.9 Isoelectric Point: 7.6543 |
Chromosome | Chromosome/Scaffold: 275 Start: 448767 End: 450607 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 296 | 0 |
ITVAQDGSGDFTTVQQAIDAVPLGNNFRTLIRVSPGVYKQPVYVPKTKNFITLAGLRPEDTFLTWNNTATKIDHHQGARLIGTGTFGCGSVIVEGEDFIA ENITFENSAPQGSGQAVALRVTADRCGFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQGRKSSQESTGYVFLR CVITGNGKASYTYLGRPWGPFGRVVFAYTYMDHCVRHVGWNNWGKSENERSACFYEYRCYGPGSCPSKRVGWCRELIDEEADQFVMHGFID |
Full Sequence |
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Protein Sequence Length: 317 Download |
MAGRVITVAQ DGSGDFTTVQ QAIDAVPLGN NFRTLIRVSP GVYKQPVYVP KTKNFITLAG 60 LRPEDTFLTW NNTATKIDHH QGARLIGTGT FGCGSVIVEG EDFIAENITF ENSAPQGSGQ 120 AVALRVTADR CGFYNCRFLG WQDTLYLHYG KQYLKDCYIE GSVDFIFGNS TALLEHCHIH 180 CKSEGFITAQ GRKSSQESTG YVFLRCVITG NGKASYTYLG RPWGPFGRVV FAYTYMDHCV 240 RHVGWNNWGK SENERSACFY EYRCYGPGSC PSKRVGWCRE LIDEEADQFV MHGFIDPNPE 300 RPWLAQRMAV RIPHSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 2.0e-88 | 6 | 298 | 308 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 7.0e-96 | 4 | 304 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 6.0e-99 | 5 | 296 | 294 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 8.0e-109 | 4 | 296 | 301 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 316 | 316 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 4 | 316 | 5 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 316 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 316 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 3 | 277 | 6 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2.8026e-45 | 8 | 277 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-25 | 5 | 302 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-25 | 5 | 302 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-25 | 5 | 302 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR994392 | 306 | 1 | 306 | 0 |
DY292729 | 314 | 1 | 313 | 0 |
DY292725 | 301 | 1 | 301 | 0 |
ES794113 | 290 | 1 | 290 | 0 |
ES794113 | 30 | 288 | 317 | 0.0002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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